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SCNpilot_expt_500_p_scaffold_57380_2

Organism: SCNPILOT_EXPT_750_P_Eukaryotic_virus_38_17

partial RP 0 / 55 BSCG 1 / 51 ASCG 1 / 38
Location: 728..1000

Top 3 Functional Annotations

Value Algorithm Source
E3 ubiquitin-protein ligase ipaH3 {ECO:0000313|EMBL:EIQ29764.1}; EC=6.3.2.- {ECO:0000313|EMBL:EIQ29764.1};; TaxID=766140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 4444-74.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 74.0
  • Bit_score: 69
  • Evalue 3.70e-09
E3 ubiquitin-protein ligase ipaH3 n=1 Tax=Shigella boydii 4444-74 RepID=I6DDC2_SHIBO similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 74.0
  • Bit_score: 69
  • Evalue 2.60e-09
ipaH_4; invasion plasmid antigen similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 72.0
  • Bit_score: 67
  • Evalue 2.40e-09

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Taxonomy

Shigella boydii → Shigella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGGCGCATGGACTTGATACTGCAGAACTATTGTCGCGCATTAGCGCGATTAAAGATGGAAAATTAGATGTTTCTTGGTTGAACGTAACAAGTCTGCCGGAATTACCTGAAACACTTACATGGCTTAATTGTTCATATACACAACTAAGTGTCCTTCCGAAGCTGCCTGAAACACTTAAAGAATTATATTGTTTAAATACACAACTAAGTGTTCTTCCGAAGCTGCCTGAAACACTTACATGGCTTAATTGTTCAAATACACAACTAAGTGTC
PROTEIN sequence
Length: 91
MAHGLDTAELLSRISAIKDGKLDVSWLNVTSLPELPETLTWLNCSYTQLSVLPKLPETLKELYCLNTQLSVLPKLPETLTWLNCSNTQLSV