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SCNpilot_expt_1000_bf_scaffold_1889_23

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(17939..18226)

Top 3 Functional Annotations

Value Algorithm Source
HigA family addiction module antidote protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1L2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 95.0
  • Bit_score: 176
  • Evalue 1.60e-41
HigA family addiction module antidote protein {ECO:0000313|EMBL:EYR79104.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 95.0
  • Bit_score: 176
  • Evalue 2.30e-41
vapI; VapI-like plasmid maintenance system antidote protein similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 90.0
  • Bit_score: 138
  • Evalue 1.50e-30

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGATGAAATCTCCTCCCCATCCGGGTGAGCTGCTTCGCGAGGACGTGCTTCAGCCGCTGGGCCTTTCGGTGACGGATGCGGCCGGTCGCCTCGGCATGTCGCGCGTCGCCCTGTCGCGCGTGCTGCATGGCCGTGCCGCGATCAGCCCCGATCTGGCGTTGCGGCTGGAGCGGGCCGGCGCTAGCACCGCCCGCGCCTGGTTGGGAATGCAGGCCAATTTCGACCTGGCGCAGGCGATGCAACGGGGCCAGCCCGACGTACAGCCTCTGGACGACAAGGCTGCCTGA
PROTEIN sequence
Length: 96
MMKSPPHPGELLREDVLQPLGLSVTDAAGRLGMSRVALSRVLHGRAAISPDLALRLERAGASTARAWLGMQANFDLAQAMQRGQPDVQPLDDKAA*