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SCNpilot_expt_1000_bf_scaffold_2123_17

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 18252..18878

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator RafR, putative n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAC1_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 198.0
  • Bit_score: 210
  • Evalue 1.70e-51
Uncharacterized protein {ECO:0000313|EMBL:KFL27715.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 206.0
  • Bit_score: 236
  • Evalue 3.10e-59
transcriptional regulator RafR similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 198.0
  • Bit_score: 210
  • Evalue 5.30e-52

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Taxonomy

Devosia sp. 17-2-E-8 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGCGGCGGCCGTTCGTGGTGCATGGCCGCGAGGCGCGCTCGACCCAGTACGGCTGGGTCGACATCGACAACTACGCCAACTTCTACAACCTGACGCGGCTGCTGATCGCCAACGGGCACCGGCATATCGCCTTCATCAACGGCGACGAGCATTTCACCTATGCGCTTTACCGCCGCCGTGGCGTCGTCGACGCCCTGCTCGACGCCGGGCGCAGCATTTCGGACCTGACGGTACTCAACACGCTGCACCCGATGGGCGACGCGGGCTTCAAGCTCACGACGCTGGCGCTCGCCGACCCGCGCATCACCGCGATCCTCTACTCATCGACGCTGATGGCGGTGGAAGGCCACGCGGCCGTGGTTCGGGCGGAGGCCGAGAACCGCCGGGTCGAGATCGCCACCATGGACGACGAATTGCACTACATCGACCTGTCAGGCTTTGCCGGCGACTGGTCCTATGTCCGATCGTCGCTGCGCGAAGCCGGCGGCGTGCTCATCGCCGAACTGCTCAACCAGTGCGAGAGCGGTGCACCGGCGCGCGGCCACATCGTGCCTTCGACGTTCCACCTGCTGCCCAAGCTGGATGGGCGGGTGCTCAGCGAACCGTTGCCGCTGAACCGGCGCTGA
PROTEIN sequence
Length: 209
MRRPFVVHGREARSTQYGWVDIDNYANFYNLTRLLIANGHRHIAFINGDEHFTYALYRRRGVVDALLDAGRSISDLTVLNTLHPMGDAGFKLTTLALADPRITAILYSSTLMAVEGHAAVVRAEAENRRVEIATMDDELHYIDLSGFAGDWSYVRSSLREAGGVLIAELLNQCESGAPARGHIVPSTFHLLPKLDGRVLSEPLPLNRR*