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SCNpilot_expt_1000_bf_scaffold_3052_8

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 7513..7797

Top 3 Functional Annotations

Value Algorithm Source
SinR family protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AEC1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 89.0
  • Bit_score: 99
  • Evalue 1.50e-18
CRISPR associated protein Cas2 {ECO:0000313|EMBL:AKI01225.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 89.0
  • Bit_score: 115
  • Evalue 3.60e-23
SinR family protein similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 89.0
  • Bit_score: 99
  • Evalue 4.60e-19

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Taxonomy

Hoeflea sp. IMCC20628 → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGAGTGTCTATATCGTGACCTATGACCTGCATAAGGTCGGTCAGAACTACACCTGCATTACCGACAAACTGAAAGGCTACGGAACCCACTGGCACATTCAGGGGTCGGTCTGGATCATCGAGACGGCCCAGTCGGCCGTTGAGGTGCGGGACTATCTTCTTCCGTGTCTCGACAACAACGACAAGCTGATTGTCGCTCACTTGTCTGGAGAAGCTGCGTGGTCCGGCTATTCTGACGACGGAAATCGCTGGCTGAAGGATTGCCTCGAAAGGGTTGCCCATTAA
PROTEIN sequence
Length: 95
MSVYIVTYDLHKVGQNYTCITDKLKGYGTHWHIQGSVWIIETAQSAVEVRDYLLPCLDNNDKLIVAHLSGEAAWSGYSDDGNRWLKDCLERVAH*