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SCNpilot_expt_1000_bf_scaffold_2863_5

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(3487..3990)

Top 3 Functional Annotations

Value Algorithm Source
SNARE associated golgi protein-like protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW37_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 145.0
  • Bit_score: 248
  • Evalue 4.50e-63
SNARE associated golgi protein-like protein {ECO:0000313|EMBL:EYR78722.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 145.0
  • Bit_score: 248
  • Evalue 6.30e-63
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 142.0
  • Bit_score: 205
  • Evalue 1.10e-50

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGGCGGCGGAGCGGAGGCGGCATGAACGGCAGGGATCAACGGAGCGGCAAGGCCGCCCGGCAAAGATGACTGCGCTCGCCGCCTATGGCGGCCTCTTCCTCACCGCCCTGATCGCCGCCACCATCCTGCCCGCGCAGTCGGAGGCCGTGCTTGCAGGCCTGCTGGTCTCCGGCAATCATGCGCCCGCCCTGCTCGTCCTCGTCGCCGGCATCGGCAACGTGCTTGGCTCGCTCGTCAACTGGCTGCTCGGCCGGGGCATCGAGCGTTTTCGCGAAGCCCGATGGTTTCCCGTCGGCGCAGGATCGCTGGAGCGCGCCGGAACCTGGTATCGCAGATACGGCTGGTGGAGCCTGCTTCTGAGCTGGCTGCCCTTCATCGGCGATCCGCTGACGGTCGCGGCGGGCATCATGCGCGAGCCGCTCTGGCGGTTCCTTCTCGTGGTCTCCATCGCAAAATTCGGCCGCTATATCGCCCTCGCCGCCATCGTGCTGCACTGGCTCTGA
PROTEIN sequence
Length: 168
MAAERRRHERQGSTERQGRPAKMTALAAYGGLFLTALIAATILPAQSEAVLAGLLVSGNHAPALLVLVAGIGNVLGSLVNWLLGRGIERFREARWFPVGAGSLERAGTWYRRYGWWSLLLSWLPFIGDPLTVAAGIMREPLWRFLLVVSIAKFGRYIALAAIVLHWL*