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SCNpilot_expt_1000_bf_scaffold_2863_13

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(9140..9901)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter-like protein; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 253.0
  • Bit_score: 441
  • Evalue 2.20e-121
  • rbh
L-cystine import ATP-binding protein TcyC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDG9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 253.0
  • Bit_score: 468
  • Evalue 4.20e-129
  • rbh
ABC-type polar amino acid transport system ATPase component {ECO:0000313|EMBL:EYR78736.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 253.0
  • Bit_score: 468
  • Evalue 5.90e-129

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGATCGAACTCACGCATATCGAGAAACGCTTCGGCGACAATGTCGTGCTGCGCGACATCAGCCTGCGGCTGGCCGAAGGCACGGTGACGTCCCTCGTCGGCCCTTCCGGCGGCGGCAAGAGCACGCTTCTGCGCTGCATCAACCTCCTCGAAATCCCGACCGCGGGCTCGATCCGCCTCGGCGAGGAGAAGATCGATTTCGCCCCCGGCCGCAAGGTCGGCTGGGACGCGATCCAGAAGCTGCGCCGCCAGACCGGCATGGTCTTCCAGAACTTCCAGCTCTTCCCGCACCAGACCGCCATCGCCAATGTGATGGAGAGCCTCGTCACCGTGCTGAAATGGCCGGCCGACAAGGCCCGGGCCCGCGCCATGGAGCTTCTCGAAAAGGTCGGCATGGCGCACAAGGCGGATGCCTGGCCGGCGACGCTTTCGGGCGGCCAGCAGCAGCGCGTGGCCATCGCCCGGGCGCTCGCGCCCTCGCCGCGCGTCCTTCTCTGCGACGAGCCGACCTCCGCGCTCGACCCGGAACTGGCCGAGGAAGTCGTGGAGGTCCTCAGCCGCCTTGCCCGCGAGGGAACGACCATGGTGATGGCGACGCATGACCTGCGCCTCGCCTCGCGCGTCGCCGATGCCGTCGTCTTTCTCGACGGCGGCGTGATCGTCGAGGAGGGACCGCCGCGCGCCATTTTCTCGACACCCGAACGCGATAGGACGAGGAAGTTCATCGCCTCGCTCAGCGCGCCGCAGAGCTATGACATCTAG
PROTEIN sequence
Length: 254
MIELTHIEKRFGDNVVLRDISLRLAEGTVTSLVGPSGGGKSTLLRCINLLEIPTAGSIRLGEEKIDFAPGRKVGWDAIQKLRRQTGMVFQNFQLFPHQTAIANVMESLVTVLKWPADKARARAMELLEKVGMAHKADAWPATLSGGQQQRVAIARALAPSPRVLLCDEPTSALDPELAEEVVEVLSRLAREGTTMVMATHDLRLASRVADAVVFLDGGVIVEEGPPRAIFSTPERDRTRKFIASLSAPQSYDI*