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SCNpilot_expt_1000_bf_scaffold_3001_9

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(7088..8065)

Top 3 Functional Annotations

Value Algorithm Source
yhbU; protease YhbU (EC:3.4.-.-) similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 325.0
  • Bit_score: 551
  • Evalue 2.00e-154
  • rbh
Protease n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CR85_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 325.0
  • Bit_score: 603
  • Evalue 1.40e-169
Protease {ECO:0000313|EMBL:EYR78624.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 325.0
  • Bit_score: 603
  • Evalue 2.00e-169

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGGAACTGATCTGCCCGGCCGGCACCCCCGCCGCCTTCCGCGAGGCGGTGGAGGCGGGCGCCGATGCCGTCTATTGCGGCTTTCGCGACGAGACCAACGCGCGCAACTTCCCCGGCCTCAATTTCAGCCGCGAGGAACTGCGCCAGTCCATCGCGCTCGCTCACAGCAAGCGCGTCCTCACCTTCGTCGCGCTCAACACCTTCATGCGGGCGGGCGACGAGGCGCTGTGGTATCGCGCGGCGGACGACGCGGTGGCGCTCGGCGCCGATGCGCTGATCCTCGCCGATTTCGGCCTGATGGCCTATGTCGCGGAAAAGTACCCTGAGCAGCGGCTGCATGTCTCCGTGCAGGCCTCGGCTTCCAATGCCGACGCCATCCGCTTCCTCATCGAGGCCTTCGGCGCAAAGCGTGTCGTGCTGCCGCGCGTCCTCACCGTGCAGGACATCGCGCGGCTGACGCGGCAGATCGACTGCGAGGTCGAGGTCTTTGCCTTCGGCGGGCTCTGCGTCATGGCGGAGGGGCGCTGCTCGCTCTCCTCCTACGCCACCGGCAAGTCGCCCAACATGAACGGCGTCTGCTCGCCCGCAAGCCATGTTCGCTACCGGCAGGATGGCCCGGACCTCGTTTCCGAGCTCGGCGCCTACACGATCAACCGATTCGCCCCCGGCGAGGCCTCCGGCTATCCGACGCTCTGCAAGGGACGCTTCGAGATCGGCGACGTCGAGGGCTACGCCTTCGAGGACCCGGTCTCGCTCGACGTCATCGACGAGATCGACGCCTTGCGCGCGGCCGGCGTCTCGGCGCTGAAGATCGAGGGACGCCAGCGCGGCAAGGCCTATGTCGCGGAGGTCGTGTCCTCGCTGAAGAAGGCGCTCGATGCGGCGCCGGCCGAGCGCGCGGCGCTCGTTGCAAGGCTTCGCGCCATGAGCGAGGGCCAGCGCACCACCACGGGCGCCTACGACAAGCGCTGGCGATAG
PROTEIN sequence
Length: 326
MELICPAGTPAAFREAVEAGADAVYCGFRDETNARNFPGLNFSREELRQSIALAHSKRVLTFVALNTFMRAGDEALWYRAADDAVALGADALILADFGLMAYVAEKYPEQRLHVSVQASASNADAIRFLIEAFGAKRVVLPRVLTVQDIARLTRQIDCEVEVFAFGGLCVMAEGRCSLSSYATGKSPNMNGVCSPASHVRYRQDGPDLVSELGAYTINRFAPGEASGYPTLCKGRFEIGDVEGYAFEDPVSLDVIDEIDALRAAGVSALKIEGRQRGKAYVAEVVSSLKKALDAAPAERAALVARLRAMSEGQRTTTGAYDKRWR*