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SCNpilot_expt_1000_bf_scaffold_3001_30

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(26680..27984)

Top 3 Functional Annotations

Value Algorithm Source
bkdB; lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC:2.3.1.168) similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 437.0
  • Bit_score: 629
  • Evalue 1.00e-177
  • rbh
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex E2 n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U510_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 438.0
  • Bit_score: 681
  • Evalue 4.10e-193
  • rbh
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase E2 component {ECO:0000313|EMBL:EYR81489.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 452.0
  • Bit_score: 735
  • Evalue 5.80e-209

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
ATGGGCGAGTTCGTCATCAAGATGCCCGATGTGGGCGAGGGCGTGGCCGAGGCCGAGCTTGTGGAATGGCACGTCAAGCCGGGCGATCCGGTGCGCGAGGACATGGTGCTCGCCGCCGTCATGACCGACAAGGCGACGGTGGAGATACCCTCTCCGGTCGACGGCGTGGTGCTCTGGCTCGGCGCCGAGATCGGCGACATCGTCGCCGTCAAGGCGCCGCTGCTGCGCATCGAGGTTGCCGGTGAGGGCGAGGCCGTTGCCGAGGAAACCCCTTCTCCCCCGCGGGGAGAAGGTGCCCGAAGGGCGGATGAGGGGGCCTTGCCGCAAGTTGCGAGAGAGCCGTCCCCGCCGCCGAGCGAGCCGCCCCCCTCATCCGGCCCCGCAGGCCACCTTCTCCCCGCGGGGGAGAAGGGAAGAGTGGCGACGCCGGAGACAAAGCCGCTCGCCTCGCCCGCCGTGCGGCTGCGGGCGCAGGAGGCCGGTGTCGATCTGCGGCAGGTGTCGGGCAGCGGCCCGGCCGGCCGCATCACCCATGACGACCTCGACCGGTTCGTCGCGCGTGGGGGCCAGCCCGCCGCCGCACCGGCCGGGCTTGCCCGCAGGACCGCGACGGAGGAGATCAAGGTCACGGGCCTGCGCCGCCGCATCGCCGAGAAGATGCGCCTTGCAAGCTCCCGCATCCCTCACATCACTTATGTGGAGGAGGTCGACGTCACCGACCTGGAGGACCTGCGCGCCACGATGAATGCCGGCCGCAAGCCCGACCAGCAGAAGCTCACCATCCTGCCCTTCCTGATGCGGGCGCTGGTGAGGACGCTCGCCGAGCAGCCCGGCGTCAACGCCACCTTCGACGACGATGCCGGCATCATCACGCGTTATGGCGCCGTCCATATCGGCATCGCCACGCAGACGCCCGCCGGCCTGACGGTGCCGGTCGTGCGCCATGCCGAGGCGCGGTCGATCTGGGACAGCGCGGCCGAGCTTTCCCGCCTCGCCGATGCCGCCCGCAACGGCACGGCGGCGCGCGAGGAGCTTTCCGGCTCCACCATCACCATCACCTCGCTCGGCGCGCTCGGCGGCATCGTCACGACGCCGATCATCAACCATCCGGAAGTGGCGATCGTCGGCGTCAACAAGATCATGATGCGGCCCGTCTGGGACGGAACCCAGTTCATTCCGCGCAAGATCATGAACCTGTCGTCGAGCTTCGACCACCGCATCGTCGACGGCTGGGACGCGGCGGTCTTCGTCCAGCGGCTCAAGGCGCTCCTCGAAACCCCCGCGCTGATCTTCATCGAAGGCTGA
PROTEIN sequence
Length: 435
MGEFVIKMPDVGEGVAEAELVEWHVKPGDPVREDMVLAAVMTDKATVEIPSPVDGVVLWLGAEIGDIVAVKAPLLRIEVAGEGEAVAEETPSPPRGEGARRADEGALPQVAREPSPPPSEPPPSSGPAGHLLPAGEKGRVATPETKPLASPAVRLRAQEAGVDLRQVSGSGPAGRITHDDLDRFVARGGQPAAAPAGLARRTATEEIKVTGLRRRIAEKMRLASSRIPHITYVEEVDVTDLEDLRATMNAGRKPDQQKLTILPFLMRALVRTLAEQPGVNATFDDDAGIITRYGAVHIGIATQTPAGLTVPVVRHAEARSIWDSAAELSRLADAARNGTAAREELSGSTITITSLGALGGIVTTPIINHPEVAIVGVNKIMMRPVWDGTQFIPRKIMNLSSSFDHRIVDGWDAAVFVQRLKALLETPALIFIEG*