ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3093_13

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 13753..15150

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J861_HYPSM similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 487.0
  • Bit_score: 395
  • Evalue 8.20e-107
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR79820.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 465.0
  • Bit_score: 718
  • Evalue 7.80e-204
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 487.0
  • Bit_score: 395
  • Evalue 2.60e-107
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1398
ATGGACGCGACCGAAAACCTCAACCTTCCCTATATCCTGCCCGCGCAGGCACAGAAGCACGTCACCCACAACGAGGCGATCAAGGCGCTGGATGCGATCCTGCATCTCGCCGTCCTCAGCCGCACCCTTTCAAGCCCGCCGGCAAGCCCGGCCGGCGGGGATCGCTATATCGTGCCGGCCGGCGCGGGCGGCGCCTGGACCGGCCAGGCGAAGGCGGTCGCCGCCTTTCAGGACGATGCCTGGACCTTCTATCCGCCGCGCGCCGGCTGGCTTGCCTATGTGCTCGACGAGAACGTCATGCTGGCCTTCAAGGGCGGCGCCTGGGCGCCGGCCAGCTTCGACATCACCCTGCCCGACCGGATCGGCATCAACGCGACGGCGGATGCGACGAACCGGCTGGCCGTCGCCTCGCCGGCCTCCCTCTTCACCAACGACGGCGCGGGGCACCAGATCAAGGTCAACAAGGCGAGTGCCGGCGATACCGCCTCGCTGCTCTTCCAGACCGGCTGGTCCGGCCGCGCCGAGATGGGCCTTGCCGGCAGCGATGCCTTCCGCGTCAAGGTGAGCGCGAACGGTTCGTCCTTCATGGACGCCATGGTGGCGGATCCGGCGACCGGGCGCGTCAGCTTCCCCGCGGGCGTGGTGGGCCTGCGGCCGCAGCTTTCCGCAAGCCGCACCTACTACGTCGCCGCCGGCGGCAGCAACGGCAATGACGGCCTGACGGCGGCCACGCCCTTCGCCACCCTGCAAAAGGCGGTGGACGAGGCGCACGGGCTCGATTGCGCCAGCCACGACGTGACGATCCAGCTTGCCGACGGCAGCTACGCCGGCGCGACGGTCGCCCGCCCGCTCCTCGGCGGCGGCACGCTCTTCATCAAGGGCAACGAGACGACGCCGGCCTCCGTGGTGCTCACGGGCGGCCTCGTCCTTTCCAACGGCGCGCAGCTGCGCGTCTCCGGCATCCGCATCGCCATTGCGTCGGACCTCGTGCACGCACTTTCCGTCGGCAACGGCGTGAGCCTCAGGCTCGGCAAGGTGGAATTCGGCGCCGTCGGCGCGAATGCCGACCACATCTTCTCCGACAATCCCTGCCGGATCGTGCTGGAGGAGAATTACGCCATCACCGGCGGCGCGCGCCGGCACATGAATATCGGGGCCGGCCTGCTGGTCGGGGAGGGCCGCACCTTCACGCTGACCGGCACGCCGGCCTTCACCCAGTTCATCGCGGCCCGCAATTCGGGAACCGTCTCGCTGCTCAACCCGGTGATCGTCGGCAGCGCCACCGGCAGCCGCTACATCGCCGAGACGAACGGCGTCATCAACACCTTCGGCAAGGCGACGACCTTCCTGCCCGGCTCGGCCACAGGCTCCAACCCCTCGGGCGGCATCTATGCCTGA
PROTEIN sequence
Length: 466
MDATENLNLPYILPAQAQKHVTHNEAIKALDAILHLAVLSRTLSSPPASPAGGDRYIVPAGAGGAWTGQAKAVAAFQDDAWTFYPPRAGWLAYVLDENVMLAFKGGAWAPASFDITLPDRIGINATADATNRLAVASPASLFTNDGAGHQIKVNKASAGDTASLLFQTGWSGRAEMGLAGSDAFRVKVSANGSSFMDAMVADPATGRVSFPAGVVGLRPQLSASRTYYVAAGGSNGNDGLTAATPFATLQKAVDEAHGLDCASHDVTIQLADGSYAGATVARPLLGGGTLFIKGNETTPASVVLTGGLVLSNGAQLRVSGIRIAIASDLVHALSVGNGVSLRLGKVEFGAVGANADHIFSDNPCRIVLEENYAITGGARRHMNIGAGLLVGEGRTFTLTGTPAFTQFIAARNSGTVSLLNPVIVGSATGSRYIAETNGVINTFGKATTFLPGSATGSNPSGGIYA*