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SCNpilot_expt_1000_bf_scaffold_3093_14

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 15205..15474

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETU8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 86.0
  • Bit_score: 148
  • Evalue 2.60e-33
Uncharacterized protein {ECO:0000313|EMBL:EYR79821.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 86.0
  • Bit_score: 148
  • Evalue 3.60e-33
YbaK/prolyl-tRNA synthetase associated protein similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 86.0
  • Bit_score: 133
  • Evalue 2.70e-29

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGTCGCTCGAATCCGTCCGCACCTTCTTCGCTGAGAACGCCCCCGATATCGACGTCCTCGTCACCGAGCAGAGCTCGGCGACCGTGGCGCTGGCCGCCGAGGCGCATGGCGTGGCGCCCGCGCAGATCGCCAAGACCATCTGCCTGCGCGTCGGCGAGGAGACCGTGCTGATCGTCGCGGCCGGCACGGCGCGGCTGAGCAACCGCAAGTTCAAGGACCGCTTCGCCGCAAAGCCCCGCATGCTGGATGCCGAGAGGTGGTCGCCGTGA
PROTEIN sequence
Length: 90
MSLESVRTFFAENAPDIDVLVTEQSSATVALAAEAHGVAPAQIAKTICLRVGEETVLIVAAGTARLSNRKFKDRFAAKPRMLDAERWSP*