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SCNpilot_expt_1000_bf_scaffold_4044_14

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(12823..14352)

Top 3 Functional Annotations

Value Algorithm Source
Ribose ABC transport system, ATP-binding protein RbsA n=1 Tax=Loktanella cinnabarina LL-001 RepID=U3ACE6_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 491.0
  • Bit_score: 594
  • Evalue 1.00e-166
  • rbh
Ribose ABC transport system, ATP-binding protein RbsA {ECO:0000313|EMBL:GAD55319.1}; TaxID=1337093 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella cinnabarina LL-001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 491.0
  • Bit_score: 594
  • Evalue 1.40e-166
sugar ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 492.0
  • Bit_score: 535
  • Evalue 1.80e-149

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Taxonomy

Loktanella cinnabarina → Loktanella → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1530
ATGCCGCAAGATCGAGCCGTTCTCGAAATGCGCGACATCGAGAAGTCCTTTGCGCACAACAGGGTGCTGAACAAGGTCGACTTCACGCTGAACCGCGGCGAAGTCCATGCGCTGATGGGCGGCAACGGCGCCGGCAAGTCGACGCTGATGAAGATCCTGTCCGGCGTCTACGAGAAGGATGGCGGGACCATCCGCATCGAGGGCGCGTCGGTCGCCTTCGCCGACGCGACCGACGCGCGGCGCGCCGGCATCGCCATGATCTTCCAGGAATTCAGCCTCGTTCCAACGCTTTCCGTGGCGCAGAACATCTTTCTCAACGGCGAGCCGAAGAAGGGCATCTTCATCCGTGACGGGGAGGCCGTGCGCCGCGCGCGCCGGATTCTCGACGAGCTCGGCGTCGACATCGATCCGCGGGTGTCCGTCAGCGAGCTGAGCGTCGGCCAGTGCCAGATGGTCGAGATCGCCAAGGCGCTGTCGCGCCAGGCGCGGATCCTCGTGATGGACGAGCCGACAGCCTCGCTGTCCGAAGCCGAGACGGAAGCCCTCTTCGCGCTGGTCGGGCGGCTGAAGGCGAGCGGCATTTCCATCATCTACATCTCGCACCGCATGGCGGAGATCTTCAGCGTGTGCGACCGCGTCACCGTCATGCGCGACGGCGGGGTGCGCCTGACGGCGCCCTGCAGCGAGGTCAGCATGGCCGAGCTGGTCGAGACCATGCTGGGATCGGACGAGGTGGAAGGCTTCAAGTGGCACGACCGCGGCTACCGCCGCTCGGGCGCGCCCCTTCTCACGCTTCGCGGCGTCAGCCTGCCGCCCCGCATCAGCGATGTCAGCTTCGAGGTCGGCGCGGGCGAGATCGTCGGCATCGCCGGGCTGATGGGGTCCGGGCGCACCGAGATCGCCGAGGCGATCTTCGGGCGCCGGCCGCTGGCCGCCGGAGAGATCCTGATCGACGGCAAGCCGGTCACCAGCCAGGCGCAGGCGATCGCCGCGGGCATCGCGCTCGTGCCGGAGGATCGCCGCCGCCTCGGCCTCGTGCTGGAACACTCCGTCGGACAGAACATGCTTCTGCCTAGCCTCGGCCTCTTTACCGCCGGCGCCTTCGTCAACGACCGCGGCGCGGCCCGCATGATCCGCCGGATGATCGAGGCGCTCAACATCAAGACGGAAAGCGCCGAAAAGCCGGCCCGGCTTCTGTCGGGCGGCAACCAGCAGAAGATCGTTCTCGGCAAATGGCTGGCGCGCCGGCCGCGCCTGCTCGTCCTCGACGAGCCCACCATCGGCGTCGATATCGGCGCGAAGTCGGAAATCGCCCGCGTCGTCCGCGAAATGGCCGACGAGGGCGTCGCGGTCGTCATCATCTCATCGGAACTGGAGGAGCTGCTGGCCGTCAGCGACCGGCTGCTCGTCCTGCACAACGGACGCATATTCCAGGACGTGCAGCGTCAGGATATCGGCTCGGAGGAGGAGCTTCACCATGCAATCCAAGGCCATCGTCTCGGAGCGGCCCCTGCAGGCGCCGCGGCTTGA
PROTEIN sequence
Length: 510
MPQDRAVLEMRDIEKSFAHNRVLNKVDFTLNRGEVHALMGGNGAGKSTLMKILSGVYEKDGGTIRIEGASVAFADATDARRAGIAMIFQEFSLVPTLSVAQNIFLNGEPKKGIFIRDGEAVRRARRILDELGVDIDPRVSVSELSVGQCQMVEIAKALSRQARILVMDEPTASLSEAETEALFALVGRLKASGISIIYISHRMAEIFSVCDRVTVMRDGGVRLTAPCSEVSMAELVETMLGSDEVEGFKWHDRGYRRSGAPLLTLRGVSLPPRISDVSFEVGAGEIVGIAGLMGSGRTEIAEAIFGRRPLAAGEILIDGKPVTSQAQAIAAGIALVPEDRRRLGLVLEHSVGQNMLLPSLGLFTAGAFVNDRGAARMIRRMIEALNIKTESAEKPARLLSGGNQQKIVLGKWLARRPRLLVLDEPTIGVDIGAKSEIARVVREMADEGVAVVIISSELEELLAVSDRLLVLHNGRIFQDVQRQDIGSEEELHHAIQGHRLGAAPAGAAA*