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SCNpilot_expt_1000_bf_scaffold_4087_10

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 9345..9635

Top 3 Functional Annotations

Value Algorithm Source
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 97.0
  • Bit_score: 194
  • Evalue 8.10e-47
lon; ATP-dependent protease LA protein; K01338 ATP-dependent Lon protease [EC:3.4.21.53] similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 97.0
  • Bit_score: 175
  • Evalue 8.80e-42
Lon protease n=1 Tax=Rhizobium sp. RepID=L0NDL4_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 97.0
  • Bit_score: 180
  • Evalue 1.10e-42

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGGCGGTCATCCAGCAGTACACCCGCGAAGCCGGTGTGCGTAACTTCGAGCGTGAATTGATGAAGCTCGCCCGCAAGGCGGTCACCGAGATCATCAAGGGCAAGTCGAAGACGGTCGAGGTCACGGCAGACAACATCCACGACTTCCTCGGCGTTCCGCGCTTCCGCCACGGCGAGGCCGAGCGCGAGGATCAGGTTGGCGTTGTTACGGGTCTTGCCTGGACGGAAGTCGGCGGCGAGCTGCTCACCATCGAAGGCGTCAGCCTGCCGGGTGGCAAGGGCCGCATGACG
PROTEIN sequence
Length: 97
MAVIQQYTREAGVRNFERELMKLARKAVTEIIKGKSKTVEVTADNIHDFLGVPRFRHGEAEREDQVGVVTGLAWTEVGGELLTIEGVSLPGGKGRMT