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SCNpilot_expt_1000_bf_scaffold_4088_10

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(6427..7392)

Top 3 Functional Annotations

Value Algorithm Source
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085804}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00301, ECO:0000256|SAAS:SAAS00085809};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 321.0
  • Bit_score: 584
  • Evalue 7.10e-164
thrB; homoserine kinase (EC:2.7.1.39) similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 320.0
  • Bit_score: 537
  • Evalue 3.80e-150
Homoserine kinase ThrB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY96_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 321.0
  • Bit_score: 584
  • Evalue 5.10e-164
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
GTGGCCGTCTATACCGATATCACCGAAGACGATCTCTCCCGTTTTCTCACCGCCTATGACGCGAGCACGCTGCTCTCCTACAAGGGCATCGCGGAGGGCGTGGAGAATTCCAACTTCCTGCTGCACACCACGAAGGGCGCCCTCATCCTGACGCTCTACGAGAAGCGCGTCGATCCGAACGACCTGCCGTTCTTCCTCGGCCTGATGCACCATCTGGCGGAAAAGGGCCTGTCCTGCCCGCTGCCCCTGCCGCCCAGCGACGGCGCGCTGCTCGGCGAGCTCTCCGGCCGCCCCGCCGCCGTCATCTCCTTCCTCGAAGGCATGTGGCTGCGCAAGCCGGCGGCCAAGCATTGCGGGGAGGTCGGCCGCGCGCTGGCGCAGATGCACCTTGCCGGCGAGGGCTTCGAGCTCACCCGCAGGAATGCGCTCTCCGTCGACGGCTGGCGGCCGCTCTGGGACAAGTCCGCCGACCGCGCGGACGAGGTGGAGACGGGGCTGCGGGACGAGATTCCCGGCGAGCTCGATCTCCTGGAAGCACGCTGGCCGAAGGACCTGCCGACGGGCGTCATCCATGCCGACCTCTTCCAGGACAACGTCTTCTTCATCGGCGACGAGCTTTCCGGCCTGATCGACTTCTACTTCGCCTGCAACGACATCCTCGCCTATGACGTCGCCACCTGCCTCAATGCCTGGTGCTTCGAGAAGGACGGTTCGTTCAACCTCACCAAGGGCATGGCGCTGCTGGAGGGCTACGAGAGCGTGCGCCCGCTGTCCGACGCCGAGGTGGCCGCGCTGCCGCTGCTGGCCCGCGGCTCGGCCATCCGCTTCTTCCTGACGCGGCTCTACGACTGGCTGATGACCCCGCCCGGCGCGCTGGTCGTCAAGAAGGACCCGCTCGAATACCTGCGCCGGCTGCGTTTCCACCGCCAGGTGCGCGACGCTCGCGAATACGGACTTTCCCGATGA
PROTEIN sequence
Length: 322
VAVYTDITEDDLSRFLTAYDASTLLSYKGIAEGVENSNFLLHTTKGALILTLYEKRVDPNDLPFFLGLMHHLAEKGLSCPLPLPPSDGALLGELSGRPAAVISFLEGMWLRKPAAKHCGEVGRALAQMHLAGEGFELTRRNALSVDGWRPLWDKSADRADEVETGLRDEIPGELDLLEARWPKDLPTGVIHADLFQDNVFFIGDELSGLIDFYFACNDILAYDVATCLNAWCFEKDGSFNLTKGMALLEGYESVRPLSDAEVAALPLLARGSAIRFFLTRLYDWLMTPPGALVVKKDPLEYLRRLRFHRQVRDAREYGLSR*