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SCNpilot_expt_1000_bf_scaffold_4272_3

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 2127..2504

Top 3 Functional Annotations

Value Algorithm Source
exodeoxyribonuclease V; K01144 exodeoxyribonuclease V [EC:3.1.11.5] similarity KEGG
DB: KEGG
  • Identity: 93.6
  • Coverage: 125.0
  • Bit_score: 245
  • Evalue 9.00e-63
Exodeoxyribonuclease V protein subunit alpha n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ82_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 125.0
  • Bit_score: 255
  • Evalue 3.60e-65
Exodeoxyribonuclease V protein subunit alpha {ECO:0000313|EMBL:EYR81765.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 125.0
  • Bit_score: 255
  • Evalue 5.10e-65

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
GTGTGCCTGCGCAACGACCCCGCCAAGGGCCTGCTCAACGGTTCGCTCTGGCAGGTGATGAGCTCGTCCAAGGAGACGGTGAAGCCCGGCATCAACCTGATGATCCGGCCGGAGGACGACGACATGGATCGCGGCGCGGCCAAGATCAAGCTGCTCAAGGCGGCCTTCGAGAATCTCGACGAGGAGATTCCGTGGTCGACGCGCAAGCGCTATGACGAGTTCGATTTCGGCTATGCGCTGACCGTGCACAAGGCGCAGGGCTCGCAGTGGAACAATGTCGTGCTGTTCGACGAGAGCTTCGCCTTCCGCGACACGCGCGAACGCTGGCTCTACACCGCCATTACACGCGCCGCGGAAACGCTCACCATCGTGCGATAG
PROTEIN sequence
Length: 126
VCLRNDPAKGLLNGSLWQVMSSSKETVKPGINLMIRPEDDDMDRGAAKIKLLKAAFENLDEEIPWSTRKRYDEFDFGYALTVHKAQGSQWNNVVLFDESFAFRDTRERWLYTAITRAAETLTIVR*