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SCNpilot_expt_1000_bf_scaffold_3602_12

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 12925..13260

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JP41_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 44.0
  • Bit_score: 85
  • Evalue 3.40e-14
Uncharacterized protein {ECO:0000313|EMBL:EYR84578.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 44.0
  • Bit_score: 89
  • Evalue 4.30e-15
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 44.0
  • Bit_score: 85
  • Evalue 1.10e-14

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGAGCGACAAGATCAAGGAAAACATGGAAGTCATCGGCGCCGATGGCGTGCATGTCGGCACGGTCGACCGCGTGGAAGGCAATCGCATCAAGCTGAAGAAGAGCGATAGCTTCGGTCATCACGAAGGCCACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGACAGGGTGCGACTGTCGGCCAATGCCGATGTCGCCGTGACGCTCGAAGAGGAGAAATCCGGCCGCCCGGTCGATCTCTGACCCGTTTCGGGGCGGCTTGCCTCCAGCCGTCCCGCTTTTCCTCCAGCGCAGGATGCCCCAATGGAAAATTATGA
PROTEIN sequence
Length: 112
MSDKIKENMEVIGADGVHVGTVDRVEGNRIKLKKSDSFGHHEGHXXXXXXXXXXXXXXXXRQGATVGQCRCRRDARRGEIRPPGRSLTRFGAACLQPSRFSSSAGCPNGKL*