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SCNpilot_expt_1000_bf_scaffold_4001_5

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 6072..6635

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQB4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 187.0
  • Bit_score: 371
  • Evalue 5.10e-100
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR80180.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 187.0
  • Bit_score: 371
  • Evalue 7.20e-100
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 187.0
  • Bit_score: 305
  • Evalue 1.10e-80

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGCTGAATACCGTTTCCAAGCCGGCCTGGGCCGGCACCACGCTCCGGCTCGATCCCAGGCGCTTTCCGCAGCAGGTGACCTTCGAGCTGCGCACGGAGGGAACCGACGCCACGATCACCCTCGACGAGCGCGGCGCCGTGCTGCGCAAGGTCCTCCCCTCCAGTGGCCTGCCGCTCTCCATCGCGCTGCCGGCCCGCGCCTTCAAGGGCGTTGCCGCCCGCGCCATCGACCACGGCAACGGCGACGTGACGGTTACGCTGGAACTGCATCACGACGATCCGGACCTGTGCATCCCGCTGCTGGTGGCGCACGATCTGTGCGACATCGCGGCCGACTGGCGAAGCTGGGCCGACGCCTACCGCATCCCCATGCTGATGGTGGAAGCCGACGGCATCGCCCGCCCGCTCGACGACAGCCTGACCGTCGGCAGCCGCCCCGCCCGGCAGCGCCGCCGCCACTCCTATTTCGCGGACCGCCGCCCACGCTTCCTCGTGCGCCGCACGACGGGCAAGCTCGGCGTCCAGATGAAGATCGACGGCCGGGAAATCATCGCCCGCCGTTGA
PROTEIN sequence
Length: 188
MLNTVSKPAWAGTTLRLDPRRFPQQVTFELRTEGTDATITLDERGAVLRKVLPSSGLPLSIALPARAFKGVAARAIDHGNGDVTVTLELHHDDPDLCIPLLVAHDLCDIAADWRSWADAYRIPMLMVEADGIARPLDDSLTVGSRPARQRRRHSYFADRRPRFLVRRTTGKLGVQMKIDGREIIARR*