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SCNpilot_expt_1000_bf_scaffold_3372_21

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(19388..21712)

Top 3 Functional Annotations

Value Algorithm Source
Chemoreceptor McpA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EYJ4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 774.0
  • Bit_score: 1302
  • Evalue 0.0
  • rbh
Chemoreceptor McpA {ECO:0000313|EMBL:EYR80860.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 774.0
  • Bit_score: 1302
  • Evalue 0.0
methyl-accepting chemotaxis protein; K05874 methyl-accepting chemotaxis protein I, serine sensor receptor similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 793.0
  • Bit_score: 760
  • Evalue 3.90e-217
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2325
ATGCTGCCAAGGACTGCGACTGCCCGGAACATGTTCGCCATCGTGGCGGCAGGTGTCGCTACCACTGTCGCGCCGGCGGGCGTTACGCTCTGGCTGTCCTACCGAGCCGTCGAGGAACGGTCGATCTCGGAAATGGTGAACGCGGCCGAGGCGAGCGCCGGCAAGGTCGATACCTACTTCGCCAAGGTCAAGGCGCTGAGCTGGAACATGCGCTCGACGCTCTATGCGATGAAGGCGACGGGCGCGCCGAGCCGCGAGACGATGAACGGCATCTTCGACCGCCTGATGGCCGACAATCCCTTCGCGCTCGGCGTCAGCACCGGCTGGGAGCCGAATGCCTTCGACGGCAAGGACGAGGCATACAGGAACGCGCCCGGCCATGACGCGACGGGCCGATACATCCCCTATTTCGTCCGCAGCGACGGCAAGGTCGGCATGGAGGCGCTGGTCGACTACGACAAGCCCGGTCCCGGCGACTACTACCAGGTGCCGAAGGCGACCGGAAAGGACTTCCTGACCGAACCCTACAGCTATGTCATCGGCGGCAAGAACGTGCTGATGACCTCCTTCATGGTGCCGCTGATGTTCGACGGCGCGTTCCAGGGCGAGACGGGCGTCGACATCGCGCTCGATGCGCTTGCCGCCGACATGGCGAGCCTCAAGCCGCTGGGCGAGGGTTATGTCGCGCTGCTGAGCCAGGGCGGCAGCATCATCAGCCATCCCGACCAGGCGACGCTCGGCAAGACGCTGGCCGATTCCGGCCTCGACGCGGCGGCCTGGCAGGCGCTGATCGCCAACCCGGAAAAGGCGATGGAGATCAAGGATGCGGGCGGCGTCCCGTCCATCGTGGTCGCGGTGCCCGTGCCGCTTGCGCCTGGAACGACCTGGTTCACCGTGGTTTCCGTGCCGAAGTCGGTGCTCTTTGCCAATCTCTCCGCCCTCGCCATCACGTCCATCGTGGTGATCGCCGGCGCCGCCGGCCTGATGATCGCGATCGGCTGGCTGCTGGCGGCCCGCTTCCGCAAGCGCCTCGACAGGGTCATCGCGGCGACGAGCGCCATTGCCGGCGGCCGCACGGATGTCGACCTTTCGGAATCGGAGCACCAGGACGAGATCGGCGAGATGGCCCGTTCGCTCGCCGTGCTGCGCGATGCGACGCTCGCCAAGGTGCGGCTGGAAGGCGAAGCCGAGCAGAACCGCGCGCTGACGGAGGAAGAGCGGCGCCAGCGCGCCGAGGAGGCGGCCGAGCGCGAACACCAGACGCGGGTTGCGGTCGAAGCGCTGGCCGAGGGCCTGCAGAGGCTCGCGGACGGCGACATGACGCACCGCATCGAGCAGGCCTTTGCCGGCTCGCTCGATCAGGTCCGCCAGGACTTCAACGCTTCCGTCGAAAAGCTGCAGTCGGCGCTTCGCTCGGTCGGCAGCAATGCCAATGCGATCGGCGCGGGCTCGGCGGAGATTCGCTCGGCTTCCGACGATCTTGCCAAGCGCACCGAGCAGCAGGCGGCTTCCGTCGAGGAGACCGCGGCGGCGCTGGAGGAGATCACCACCTCGCTCAAGGATGCGACCAAGCGCGCGGAGGATGCCGGCCAGCTCGTCGAGCGCACCCGCGCCGGCGCCGAGAAGTCCGGCGAAGTCGTGCGCCGGGCGGTGGACGCGATGAGCGGCATCGAGACGTCCTCGCGGGAAATCTCCAATATCATCGGCGTGATCGACGAGATCGCCTTCCAGACGAACCTCCTGGCGCTGAATGCCGGCGTGGAAGCCGCGCGCGCAGGGGAGGCCGGCAAGGGCTTTGCCGTCGTCGCGCAGGAAGTGCGCGAACTCGCCCAGCGTTCGGCCAATGCCGCCAAGGAGATCAAGGCGCTCATCACCAAGTCCGGCGAGCAGGTGCATCTCGGCGTCGCGCTTGTCGGCGAGACCGGGTCGGCGCTTTCGGAAATCGTCAACCAGGTGCAGGAGATCGACCAGAACGTCGCGGCGATCGTGCGGTCCGCGCGCGAGCAGTCGACGGGCCTCAACGAGATCAGCTCGGCCGTCAACTCCATCGACCAGGGCACGCAGAAGAATGCGGCCATGGTGGAGGAGCAGACGGCGGCGAGCCACGCGCTGGCGACCGAAGCGGCGGCACTGAACGATCTCATCGCGCAGTTCCAGCTCGGCACGCGCGTCACCGTCAACCGAACCGTCGCGGCCGCTCCCGCCGAGCAACGCCCTGCGGCATCCGGCGCGCGGGCGCTCGGCAACAAGCTTGCCCGCGCCTTCGGCGGCGCAGGGCAGGCTGCCGCGGCGAATGCGGCGGCGCAGGACTGGGAAGAGTTCTGA
PROTEIN sequence
Length: 775
MLPRTATARNMFAIVAAGVATTVAPAGVTLWLSYRAVEERSISEMVNAAEASAGKVDTYFAKVKALSWNMRSTLYAMKATGAPSRETMNGIFDRLMADNPFALGVSTGWEPNAFDGKDEAYRNAPGHDATGRYIPYFVRSDGKVGMEALVDYDKPGPGDYYQVPKATGKDFLTEPYSYVIGGKNVLMTSFMVPLMFDGAFQGETGVDIALDALAADMASLKPLGEGYVALLSQGGSIISHPDQATLGKTLADSGLDAAAWQALIANPEKAMEIKDAGGVPSIVVAVPVPLAPGTTWFTVVSVPKSVLFANLSALAITSIVVIAGAAGLMIAIGWLLAARFRKRLDRVIAATSAIAGGRTDVDLSESEHQDEIGEMARSLAVLRDATLAKVRLEGEAEQNRALTEEERRQRAEEAAEREHQTRVAVEALAEGLQRLADGDMTHRIEQAFAGSLDQVRQDFNASVEKLQSALRSVGSNANAIGAGSAEIRSASDDLAKRTEQQAASVEETAAALEEITTSLKDATKRAEDAGQLVERTRAGAEKSGEVVRRAVDAMSGIETSSREISNIIGVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSANAAKEIKALITKSGEQVHLGVALVGETGSALSEIVNQVQEIDQNVAAIVRSAREQSTGLNEISSAVNSIDQGTQKNAAMVEEQTAASHALATEAAALNDLIAQFQLGTRVTVNRTVAAAPAEQRPAASGARALGNKLARAFGGAGQAAAANAAAQDWEEF*