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SCNpilot_expt_1000_bf_scaffold_4422_10

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(10714..12378)

Top 3 Functional Annotations

Value Algorithm Source
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 554.0
  • Bit_score: 999
  • Evalue 1.60e-288
dnaG; DNA primase; K02316 DNA primase [EC:2.7.7.-] similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 562.0
  • Bit_score: 846
  • Evalue 5.10e-243
DNA primase DnaG n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EV38_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 554.0
  • Bit_score: 999
  • Evalue 1.10e-288
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1665
CAGCCGGACCCGCAGGCCGAGCAGCGCGAGAAGGAGCGCATGGGCCTCGTCGAGGTCATGGAGATGGCTACCCGCTTCTTCGAGGACCAGCTCCAGACGCCGGCCGGGGCGAAGGCGCGCGCCTATCTGCGCGACCGCGGGCTGACCGGCCGCACCATCGAGACTTTCCGCCTTGGCTATGCGCCGGAGAGCCGCAACGCGCTGAAGGAGTTTCTGGCGGGCAAGGGCGTGCCGAAGGAGGCGATCGAGGCCTGCGGCCTCGTCGTGCACGGGCCGGAAATCCCCGTCTCCTACGACCGGTTCCGCGACCGCATCATGTTCCCCATCCTCTCGGTGCGGGAAAAGGTCATCGCCTTCGGCGGCCGCGCCATGTCGCCGGACGCGCCGGCGAAATACCTCAATTCCAACGAGACGGAGCTCTTCCACAAGGGAAGCGTGCTCTATAACCACGCCCGCGCCCGAAAAGGGGCGCAAGGGGCTGATGGGACGGGGACGATCATCGCCGTCGAAGGCTACATGGACGTGATCGCGCTCTACCAGGCGGGCATCGAGAATGCCGTCGCCCCGCTCGGCACGGCGCTGACCGAGAACCAGCTCGACCTGCTCTGGAAGATGACGCCGCAGCCGGTGCTCTGCTTCGACGGCGACGGGGCGGGCATCCGCGCGGCGAATCGGGCGGCCGACCTCGCGCTGCCCTTCATCAAGCCGGGCCGCACGGTGCGCTTCGCGCTGCTGCCGGACGGCAAGGACCCTGATGACCTCGTGCGCCACGAGGGCCGCGCGCCCTTCGACAAGGTGCTGGCGAACGCCCGCCCGCTCGCCGACATGATCTGGAACCGCGAGGTCCAGGGCTCGGCGCTGGACACGCCGGAAAGCCGCGCCGAACTCGAATCGCGCCTGCGCCAGATCACCGCCGGTATCGCCGACGAGGACGTGCGCCGCCACTACCAGCAGGACATGCGCGAGCGGCTGAACGCCTTCTTCCGCCCCGCCCAGCGGCAGGGCGGCGGCGGCTTTTCCGGCAACCGGCAGGGCAGGGGCGGCGGCCGCGGCGGGCCGCATGGCAATATGGTCCCCTCCGGCATTTCCGATCGGCTCGCCCGCTCGGCGCTTGTGCGCGGCGCGCAGGAACTGCCGGCCCTGCGTGAAAGCGTGCTGGCGCTCACCGTCGTCAACCATCCGGGCCTTCTCTTCAGCGACTATGACGAGATCGCCATTATCGAATACGAGAACCGCGACCTCCAGCGCCTCTGGTCGGCCCTCATCGGCATTGCCGGTTCCGTCGGCGCGCGGCTCGACCGCGCCCGGCTGGTCGAGGAACTGGAAGCCGCCGGCTTCGACACCCTGCTCAGGGGCCTCGACCAGCAGATTCGCAATTCGCGCCTGTGGACCGCGACGGAAGACGCAGCGCCCGAGGATGCCCGCGAAGGCTATCTCCAGGCGCTCGCTCTCCACAAGCGCACCCGCGCGCTCCTCTGGCAGCGCCGCGAGCTTGAACGCGAACTCGCCGTCTCGACGGATGAGGGCGACGACGAGCGCGTGCCGCAGATCCTGCGCGCGCTTCAGGAGGTGCAGATGGAGACCGTCCGGATGGAGAACCAGGAGGCCATCATCGAAGGCTTCGGTGTGCTCTCCGGCCGGGTGAAGGGGCCGGCGGGGAAGTAG
PROTEIN sequence
Length: 555
QPDPQAEQREKERMGLVEVMEMATRFFEDQLQTPAGAKARAYLRDRGLTGRTIETFRLGYAPESRNALKEFLAGKGVPKEAIEACGLVVHGPEIPVSYDRFRDRIMFPILSVREKVIAFGGRAMSPDAPAKYLNSNETELFHKGSVLYNHARARKGAQGADGTGTIIAVEGYMDVIALYQAGIENAVAPLGTALTENQLDLLWKMTPQPVLCFDGDGAGIRAANRAADLALPFIKPGRTVRFALLPDGKDPDDLVRHEGRAPFDKVLANARPLADMIWNREVQGSALDTPESRAELESRLRQITAGIADEDVRRHYQQDMRERLNAFFRPAQRQGGGGFSGNRQGRGGGRGGPHGNMVPSGISDRLARSALVRGAQELPALRESVLALTVVNHPGLLFSDYDEIAIIEYENRDLQRLWSALIGIAGSVGARLDRARLVEELEAAGFDTLLRGLDQQIRNSRLWTATEDAAPEDAREGYLQALALHKRTRALLWQRRELERELAVSTDEGDDERVPQILRALQEVQMETVRMENQEAIIEGFGVLSGRVKGPAGK*