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SCNpilot_expt_1000_bf_scaffold_4615_3

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(1480..2757)

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGP7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 423.0
  • Bit_score: 740
  • Evalue 7.30e-211
  • rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:EYR80376.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 423.0
  • Bit_score: 740
  • Evalue 1.00e-210
inner membrane transport protein YeaN similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 423.0
  • Bit_score: 686
  • Evalue 5.10e-195
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
ATGACCCATCCCCTCCCCGACGATCCCGGCTCCATCGACCTGATCGACGCCGAAGCCGACAGCGTGCCCGCACCGGAACCGCATCGCCCGCCCGGCACGGCGGCGCGCATCCTGCTCGGCGCCAGCCTCGTGCTGATCGCCTTCAACCTGCGGCCGGTCTTTTCCAGCGCCTCGGCGCTGCTGCCGGAGATCCGCGACGTGCTCGGCCTTTCGCCGACCGGCGCCAGCCTGCTGACGACGCTGCCCGTCGTCTGCCTCGGCCTGTTCTCGCCGCTCGCCCCGCGCCTTGCCCAGCGCTACGGCACCGAGCGCACCCTGCTCGGCGTCGTGCTCATCCTCGCGCTCGGCACGGCGCTGCGCGGCCTTTCCTCCATTCCGCTGCTCTTTCTCGGCACGGCGCTGGCCGGCGCCTGCATCGCCGTCGGCAACGTGCTGCTGCCGGGCCTCGTCAAGCGCGACTTCCCGGACCGGGCGGCGCTGATGACCGGCTGCTACACGATGGCGCTCTGCGCGGGCGCGGCAAGCGCCGCGGGGCTGACGCTGCCGGTGGAGCACCTGCTCGGCGGCTCGCTCGGCGGGGCCTTGGCGATCTGGGCGCTGCCGGCGCTGCTGGTGGCGCTACTCTGGCTGCCGCAGGTCCTTGCCAGCCGCCGGCAGGTCAAGCGCACCGGCTTTCGCGTGGAGGGCCTGTGGCGCGACCGGCTCGCCTGGCACGTCACGCTCTTCATGGGCCTGCAATCGGCGCTCGCCTATTGCGTCTTCGGCTGGCTGGTGCCGATCCTGCGCGAGCGGGGGCTGGACGGCGTGACCGCCGGCGCCATCGTCTCCGTCTCCGTCATGGTGCAGGCGGCCGCCTGCCTCGTCGCGCCGCATCTTGCCGTGCGCGGCAAGGACCAGCGGGTGATCAACGTCACGCTCTGCGCCCTCGCCGTCGTCGCGCTTCTCGGCCTGCTCTTCGCGCCGCTCTCCACCGTCTGGTTCTGGGCCGTGCTGCAGGGCATCGGCCAGGGCGGGCTGATCGCGGTGGCGATGACCGTGATCGTGCTGCGCACGCGCGATCCGCACATGGCGGCGCATCTTTCCGGCATGGCGCAATGCGTCGGCTACCTGCTTGCCGCCATCGGCCCGCTGATCGTCGGCCTCATCCGCGGCTGGACGGGCAGTTTCGGCTGGAGCGCGGTGCTCATCGTTCTGCTCGGCATCGGCGCGGCGATCAACGGCTGGTTCGCCGGGCGGGCGCTCTACGTCAATGCCCGCACGGTGGAAACGTCTCCCTGA
PROTEIN sequence
Length: 426
MTHPLPDDPGSIDLIDAEADSVPAPEPHRPPGTAARILLGASLVLIAFNLRPVFSSASALLPEIRDVLGLSPTGASLLTTLPVVCLGLFSPLAPRLAQRYGTERTLLGVVLILALGTALRGLSSIPLLFLGTALAGACIAVGNVLLPGLVKRDFPDRAALMTGCYTMALCAGAASAAGLTLPVEHLLGGSLGGALAIWALPALLVALLWLPQVLASRRQVKRTGFRVEGLWRDRLAWHVTLFMGLQSALAYCVFGWLVPILRERGLDGVTAGAIVSVSVMVQAAACLVAPHLAVRGKDQRVINVTLCALAVVALLGLLFAPLSTVWFWAVLQGIGQGGLIAVAMTVIVLRTRDPHMAAHLSGMAQCVGYLLAAIGPLIVGLIRGWTGSFGWSAVLIVLLGIGAAINGWFAGRALYVNARTVETSP*