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SCNpilot_expt_1000_bf_scaffold_4923_12

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(9091..9462)

Top 3 Functional Annotations

Value Algorithm Source
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase {ECO:0000313|EMBL:EYR83525.1}; EC=4.1.1.n1 {ECO:0000313|EMBL:EYR83525.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 106.0
  • Bit_score: 177
  • Evalue 1.00e-41
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYT5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 106.0
  • Bit_score: 177
  • Evalue 7.20e-42
OHCU decarboxylase similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 106.0
  • Bit_score: 169
  • Evalue 8.00e-40

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGATCGACCGCGCCGACTTCCTCGACCGCTTCGGCGGCGTCTTCGAGCATTCCCCCTTCATCGCTGAGAGCGCGCTCGATGCCGGTGCGGTCACCCTGCCGTTGACCGCGCAGGGCGTCCATGCGGCGTTGACCGATGCCTTCCGCAAGGCGAGCCGCGACGAACAGATGGGCGTTCTCACCGCGCATCCCGATCTTGCCGGCAAGCTCGCCATTTCCGGCGAACTGACGGAGGACAGCCGCAAGGAACAGGCCGGCGCCGGCCTCGACCGGCTGAGCCCGGCCGAGCACGCCCGCTTCACGGAGCTCAACANNNNNNNNNNAACACCGCCTATACGGAAAAATTCGGTTTCCCCTTCATCATCGCGGTGA
PROTEIN sequence
Length: 124
MIDRADFLDRFGGVFEHSPFIAESALDAGAVTLPLTAQGVHAALTDAFRKASRDEQMGVLTAHPDLAGKLAISGELTEDSRKEQAGAGLDRLSPAEHARFTELNXXXXTPPIRKNSVSPSSSR*