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SCNpilot_expt_1000_bf_scaffold_5218_3

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(2217..2975)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036DA030 similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 213.0
  • Bit_score: 279
  • Evalue 4.70e-72
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:EJC63500.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 211.0
  • Bit_score: 272
  • Evalue 6.10e-70
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 211.0
  • Bit_score: 269
  • Evalue 1.50e-69

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGGCGTCAGCACAGATACACACAGGCATCGCAAATCATTCCGCTCATAAGTTCTCTGATATACAGGCGATCAACGGAAAGCAGATTCCGGCAGGGTTTTCGCTGCTGGAGAAATCCATAATGGTGTTGGATAGAAGGGCCTTGAACGGGCAGTGTCTGGCAAGATGCCTGGCATCGCAGAAGGCCGAGATGGAATTCATCGCCGTCACGTCGGCAGAGCACTGGAAGTCGCTGGCGGACGATGCCCCTCCGCTCGTGGCGATCCTGCTCAACATCGGAGGCGAGAGCGCCGACGATCCGTCCGTGGCCGAATGCGTCAGGGCTCTCTCGATGGAATTCGACGTGCCCGTCATCCTTCTGGCGGATTCCGTGGACCTCCTGCAGATCATGAAGGCGCTCGAATTCGGGGCGAAGGGCTATATCCCATCGTCGGTGACGATCGATGTCTGCATCGAGGCAATAGCATTGTCGCTTGCGGGCGGCGTGTTTTTGCCGGCAAGCAGCGTGCTTGCGATGCGCCAGGTGCTTGAAAGCGAAGTCTCCGTGGAGCGCCCGCTCGACAGCATGTTCACGGCGCGGCAGATCGAGGTCGTAAACGCATTGCGCCGCGGCAAGGCCAACAAGATCATCGCCTACGAGCTCAATCTTCGTGAAAGCACGGTCAAGGTGCATATCAGGAACATCATGAAGAAGATGAAGGCGACCAACCGGACGGAAGTGGCCTACAAACTCAACGAGCTGTTCCCGCTGGACTCCTGA
PROTEIN sequence
Length: 253
MASAQIHTGIANHSAHKFSDIQAINGKQIPAGFSLLEKSIMVLDRRALNGQCLARCLASQKAEMEFIAVTSAEHWKSLADDAPPLVAILLNIGGESADDPSVAECVRALSMEFDVPVILLADSVDLLQIMKALEFGAKGYIPSSVTIDVCIEAIALSLAGGVFLPASSVLAMRQVLESEVSVERPLDSMFTARQIEVVNALRRGKANKIIAYELNLRESTVKVHIRNIMKKMKATNRTEVAYKLNELFPLDS*