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SCNpilot_expt_1000_bf_scaffold_5218_7

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 6267..6695

Top 3 Functional Annotations

Value Algorithm Source
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 141.0
  • Bit_score: 233
  • Evalue 1.40e-58
rfbA; glucose-1-phosphate thymidylyltransferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 141.0
  • Bit_score: 231
  • Evalue 1.50e-58
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HCK7_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 141.0
  • Bit_score: 233
  • Evalue 9.80e-59

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
ATGAAAGGCATCATTCTCGCCGGCGGCAACGGCACGCGGCTGCATCCGATGACGATCGCGATCAGCAAGCAGATCCTGCCGGTCTACGACAAGCCGATGATCTACTACCCCCTGACGACGTTGATGCTGGCGGGGATCCGCGAAATCCTCATCATATCGACCCCGCACGACATGCCGCACTTCCAGACGCTGCTCGGCGACGGCTCGCAGTGGGGCCTCAGCCTGACCTATGCCATCCAGCCCCGGCCGGAAGGGCTGGCGCAGGCCTTCGTGATCGGCGCGGATTTCATCGACGGGTCGCATTGCTGCCTGATCCTCGGAGACAACATCTTCTTCGGCCATGGACTTCCCCAGCTCATGGCCGATGCGCAGGGCAATGCTACCGGCGGCACCGTCTTCGCCTACCATGTCGTCGATCCGAGGCCATGA
PROTEIN sequence
Length: 143
MKGIILAGGNGTRLHPMTIAISKQILPVYDKPMIYYPLTTLMLAGIREILIISTPHDMPHFQTLLGDGSQWGLSLTYAIQPRPEGLAQAFVIGADFIDGSHCCLILGDNIFFGHGLPQLMADAQGNATGGTVFAYHVVDPRP*