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SCNpilot_expt_1000_bf_scaffold_5177_3

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(1521..2606)

Top 3 Functional Annotations

Value Algorithm Source
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 361.0
  • Bit_score: 652
  • Evalue 4.10e-184
dihydroorotate dehydrogenase; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 358.0
  • Bit_score: 548
  • Evalue 1.40e-153
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D7K2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 361.0
  • Bit_score: 652
  • Evalue 2.90e-184
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1086
ATGTCGTTCCTGTCCAGCCTCGGCCGCAAGGGCCTCTTCCTTTTCGATCCGGAAACCGCCCACGGCCTGTCGATCGCCGCGCTGAAGGCCGGCATCGTGCCCGCCTGCCCCGCAAAGGCCGATCCGCGACTTGCCCAGACGGTCGCGGGCATCGCCTTCCCCAATCCGCTCGGCATCGCCGCCGGCTACGACAAGAATGCCGAAGTGCCGGAAGCGCTGCTGCGCCTCGGCTTCGGCTTTGCCGAAATCGGCACGGTGACGCCGCGCCCGCAGGAGGGCAATCCGAAGCCCCGCATCTTCCGCCTCACCGCGGACGATGCCGTCATCAACCGGCTCGGCTTCAACAACGAAGGCCACGCCGCCGCCCTCGGGCGCATGAAGGGCTGCCGGCGCGATGCGCTGATCGGCGTCAATATCGGCGCCAACAAGGACAGCGAGGACCGTATCGGCGACTATGTGCAGGGCATCCGCACCTTCTACGATGTCGCCCGCTACTTCACCGCCAACATCTCCTCGCCCAACACGCCGGGGCTGCGCGACCTCCAGGCCAGGGAAAGCCTGCACGCGCTGCTTTCCGCCGTGCTCGCGGCCCGCGCCGAGGAACAGGCGCGCAGCGGCCGGCAGGTGCCCGTCTTCCTGAAGATCGCGCCCGACCTGACCGAGGAAGGCCTCGACGACATCGCCGAGGTGGGGCTCGCCCATCCGCTCGACGGCCTCATCGTCTCCAACACCACGCTGTCGCGCGCGGGCCTTCGCGACACGCGCCACGCGGGCGAGGCAGGCGGGCTCTCCGGCAAGCCGCTCTTCGAGAAGTCGACCGTCGTGCTCGCCAAGATGCGCCGGCGCGTCGGCGGGAACCTGCCGATCATCGGCGTCGGCGGCGTCTCCTCGGCGGAGACGGCGGCGGAGAAGATCCGCGCGGGGGCGAATCTCGTGCAGCTCTATTCCTGCATGGTCTATGCCGGCCCGACGCTGCCGGGCGAAATCGTGAACGGCCTCTCGCGCATTTGTGATCGCGAGCAGATCGCCTCGATTTCCACGCTTTGCGGCACCCGCACGGCCCATTGGGCCGACCGCACCCTCTGA
PROTEIN sequence
Length: 362
MSFLSSLGRKGLFLFDPETAHGLSIAALKAGIVPACPAKADPRLAQTVAGIAFPNPLGIAAGYDKNAEVPEALLRLGFGFAEIGTVTPRPQEGNPKPRIFRLTADDAVINRLGFNNEGHAAALGRMKGCRRDALIGVNIGANKDSEDRIGDYVQGIRTFYDVARYFTANISSPNTPGLRDLQARESLHALLSAVLAARAEEQARSGRQVPVFLKIAPDLTEEGLDDIAEVGLAHPLDGLIVSNTTLSRAGLRDTRHAGEAGGLSGKPLFEKSTVVLAKMRRRVGGNLPIIGVGGVSSAETAAEKIRAGANLVQLYSCMVYAGPTLPGEIVNGLSRICDREQIASISTLCGTRTAHWADRTL*