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SCNpilot_expt_1000_bf_scaffold_5177_8

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 7675..8115

Top 3 Functional Annotations

Value Algorithm Source
Large-conductance mechanosensitive channel n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BX98_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 146.0
  • Bit_score: 265
  • Evalue 2.40e-68
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 146.0
  • Bit_score: 265
  • Evalue 3.30e-68
mscL; large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 143.0
  • Bit_score: 234
  • Evalue 2.40e-59

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGCTCAATGAGTTCAAGGCGTTTATCGCCCGCGGCAATGTCATGGACCTCGCCGTGGGTGTCATCATCGGTGCAGCCTTCAACAAGATCGTCGAATCCGTCGTGAACGACCTTGTCATGCCGATCGTCGGCGCCTTGACGGGGGGAGGTTTCGACTTTTCCAACTACTTCATCGCCCTGTCGGGCAACGTGACCGCCTCTTCGCTGGCCGCCGCACGCGAACAGGGCGCGGTCTTCGCCTACGGCAATTTCATCACCGTCTTCATCAATTTCCTCATCCTCGCCTGGATCATCTTCCTGATGATCAAGGCCGTGAACCGCATGCGCGCCTCGCTGGAGAAGGAAAAGGCCGAGGGCGCCGCCGAGCCGGCCCCGCCGCCGGAAGACGTGCTGCTCCTCACGGAGATCCGCGACCTGCTCAAGACCCGCCCGGCGGTCTGA
PROTEIN sequence
Length: 147
MLNEFKAFIARGNVMDLAVGVIIGAAFNKIVESVVNDLVMPIVGALTGGGFDFSNYFIALSGNVTASSLAAAREQGAVFAYGNFITVFINFLILAWIIFLMIKAVNRMRASLEKEKAEGAAEPAPPPEDVLLLTEIRDLLKTRPAV*