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SCNpilot_expt_1000_bf_scaffold_5177_15

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 14685..15413

Top 3 Functional Annotations

Value Algorithm Source
Histidine transport system permease protein HisQ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZL9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 242.0
  • Bit_score: 441
  • Evalue 6.80e-121
  • rbh
Histidine transport system permease protein HisQ {ECO:0000313|EMBL:EYR83367.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 242.0
  • Bit_score: 441
  • Evalue 9.60e-121
putative amino acid ABC transporter, inner membrane component; K02029 polar amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 237.0
  • Bit_score: 389
  • Evalue 7.40e-106
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGGCCGACGCCGGATCGCTGATCAACTGGAGCCTGCTTGCCCTCGAACCGCCCGGCTGGGGCGGGGTTCTCCTCGCCGGGCTCTGGAACTCCGTCCAGATCGCGGTCGGCGGATATGCGCTCGGCCTCCTGCTCGGCACGGGCGGCGCCATGGGCAAGCTCTATGGCGGCCCGATCACGAAGGACCTGCTGGAGGTCTATACGACGCTGGTGCGGGCAGTGCCGGAACTCGTGCTGATCCTCATTCTCTATTATGCCGGCACGGACATGTTGAACCAGATCTCCGCCGCCCTCGGCTGGGGTGCGGTCGACATCAGCGGCCTCGCGGCGGGCATCTTCGTCATCGGCGTCGTGCAGGGCGCCTATTCGACCGAAGTGCTGCGCGGGGCGATCAAAGCGGTGCCGGCAGGGCAGATCGAGGCGGCGCGCGCCTATGGCATGTCACCCACCCGGATCATGCGTCGCATCACGCTGCCGGCCATGCTGCCGCACGCCATCCCCGGCCTTTCCAACCTCTGGCTGATCGCCACCAAGGATACGGCCTTGCTGGCCGTCGTCGGCTTCAGCGAGCTGACACTGGTCACGCGCCAGGCAGCAGGCAGCACCAAGGCCTACCTTCTCTTCTTCTGCGCGGCCGGCGTGCTGTACCTGACCCTCACGCTGGTCTCGAACGTGCTGATCGGCTTCATCGAGCGCCGCTACAGGCGCGGCATGGCGGAGCCGGCATGA
PROTEIN sequence
Length: 243
MADAGSLINWSLLALEPPGWGGVLLAGLWNSVQIAVGGYALGLLLGTGGAMGKLYGGPITKDLLEVYTTLVRAVPELVLILILYYAGTDMLNQISAALGWGAVDISGLAAGIFVIGVVQGAYSTEVLRGAIKAVPAGQIEAARAYGMSPTRIMRRITLPAMLPHAIPGLSNLWLIATKDTALLAVVGFSELTLVTRQAAGSTKAYLLFFCAAGVLYLTLTLVSNVLIGFIERRYRRGMAEPA*