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SCNpilot_expt_1000_bf_scaffold_5177_22

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 19802..21217

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome d ubiquinol oxidase subunit 1 {ECO:0000313|EMBL:EYR83372.1}; EC=1.10.3.- {ECO:0000313|EMBL:EYR83372.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 471.0
  • Bit_score: 914
  • Evalue 4.40e-263
Cytochrome bd-type quinol oxidase, subunit 1 (EC:1.10.3.-) similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 471.0
  • Bit_score: 824
  • Evalue 2.30e-236
  • rbh
cytochrome D ubiquinol oxidase subunit I n=1 Tax=Sinorhizobium medicae RepID=UPI00036BA86F similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 471.0
  • Bit_score: 824
  • Evalue 5.60e-236
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1416
ATGTTCGAAACGCTGGATGCAACGCTGCTCGCCCGGTTCCAGTTCGCCTTCACAGTCTCCTTCCACATCGTCTTTCCCGCCTTCTCCATCGGCCTTGCGAGCTATCTCGCCGTGCTGGAGGGCCTGTGGCTGTGGACGAAGGACGAGGTCTATTTCGCGCTCTTCAATTTCTGGAAGACGATCTTCGCGCTCGCCTTCGGCATGGGCGTCGTGTCAGGCATCGTCATGTCCTACCAGTTCGGCACGAACTGGAGCGTCTTTTCCGACAAGGCCGGGCCGGTCATCGGCCCGCTGATGGGCTACGAGGTGCTGACGGCCTTCTTCCTGGAGGCGGGCTTCCTCGGCGTCATGCTGTTCGGCCTCAACCGCGTCGGCCCGCGGCTGCATTTCTTCGCCACGCTGATGGTGGCCGTCGGAACGCTGATCTCGGCCACCTGGATCCTCGCCGCCAATTCCTGGATGCAGACGCCGGCCGGCTTTTCCGTCAACGCGGCGGGCCAGTTCGTGCCCACCGACTGGTGGGGGGTGATCTTCAACCCGTCCTTCCCCTACAGGCTCGTGCACATGGTGCTCGCCGCCTATCTCACCACCGCCTTCGTCGTCGGCGGCGTCGGGGCCTTCCACCTCCTGCGCGGCGATGCGCCGAAGCGGGCGAGGAAGATGTTCTCCATGGCGATGTGGATGGCGGCGCTCGTCGCGCCCATCCAGATATTCGCCGGCGACATGCACGGCCTCAACACGCTGGAGCACCAGCCGGCCAAGGTCATGGCGATGGAGGGCCACTTCCGGAGCCACCCGGACGGCGCGCCGCTCATCCTCTTCGGCCTGCCGAACGCCGCCGAGCAGCGCGTCGACTACGCCGTCGAGATCCCCAAGCTGTCGAGCCTCATCCTCAAGCACGACCTGAATGCGCCGCTGGCGGGCCTCGATACGGTGCCGCGCGAACTGCAGCCGCCGGTCGCGGTCGTGTTCTGGTCCTTCCGCGTCATGGTCGCCATCGGCTTTGCCATGCTCGGCCTCGGCCTGTGGTCGCTCTGGTGTCGCTGGCGCGGCACGCTCGGCGAGAACCGCTGGCTGCACCGCGCCGCCGTGCTGATGGCCCCCGCCGGCTTCCTCGCCGTGCTCGCCGGCTGGGTGACGACGGAGGTCGGCCGCCAGCCCTATACGGTCTACGGCCACCTGCTGACGGCCGATTCCGTCGCGCCCGTCGACGCGCCTGCCGTCGCGACCTCGCTGATCGCCTTCATCATCGTCTATTTCCTCGTCTTCGGCGCGGGCACCTTCTATATCCTGCGCCTGATGGGCCGCCTGCCGCGCGATCCCATGCCCGCGCTGGAAGGCCCGATCCGCACGGCCGGCATCACGCCCGCCGCCGCCGTCGCCAGCAAAGCCGGGAGCCCGCATCATGGCGCTTGA
PROTEIN sequence
Length: 472
MFETLDATLLARFQFAFTVSFHIVFPAFSIGLASYLAVLEGLWLWTKDEVYFALFNFWKTIFALAFGMGVVSGIVMSYQFGTNWSVFSDKAGPVIGPLMGYEVLTAFFLEAGFLGVMLFGLNRVGPRLHFFATLMVAVGTLISATWILAANSWMQTPAGFSVNAAGQFVPTDWWGVIFNPSFPYRLVHMVLAAYLTTAFVVGGVGAFHLLRGDAPKRARKMFSMAMWMAALVAPIQIFAGDMHGLNTLEHQPAKVMAMEGHFRSHPDGAPLILFGLPNAAEQRVDYAVEIPKLSSLILKHDLNAPLAGLDTVPRELQPPVAVVFWSFRVMVAIGFAMLGLGLWSLWCRWRGTLGENRWLHRAAVLMAPAGFLAVLAGWVTTEVGRQPYTVYGHLLTADSVAPVDAPAVATSLIAFIIVYFLVFGAGTFYILRLMGRLPRDPMPALEGPIRTAGITPAAAVASKAGSPHHGA*