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SCNpilot_expt_1000_bf_scaffold_6287_4

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 1622..2515

Top 3 Functional Annotations

Value Algorithm Source
capsid protein n=1 Tax=Rhizobium giardinii RepID=UPI0003604AC0 similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 297.0
  • Bit_score: 538
  • Evalue 5.00e-150
Phage major capsid protein, HK97 family {ECO:0000313|EMBL:EYR83854.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 297.0
  • Bit_score: 543
  • Evalue 2.20e-151
phage major capsid protein HK97 family similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 297.0
  • Bit_score: 483
  • Evalue 3.50e-134

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGTCGGTCGGCTCGGCGGCGGACGGCGGCTATCTCGTGCCGCCGGAAACCGATACGGAGATCGGCCGGAGGCTTTCCGCCGCTTCGCCGATCCGGGCGCTGGCGACGGTGCGGCAGGTCTCTGGTGCGGTGCTGAAGAAGCCCTTCGCGACCTCCGGCATGGCCTGCGGCTGGGTGGCGGAGACGGCCTCGCGGCCGCAGACCAATGCCGCGCAGCTTGCCGAGCTCTCCTTCCCGACCATGGAGCTTTACGCCATGCCGGCGGCGACGGCGGCGCTGCTCGACGATGCGGCGGTGGACGTGGAAAGCTGGATCGCCTCGGAGGTCGACATCGTCTTCGGCGAGCAGGAAGGCACGGCCTTCGTCTCCGGCGACGGCACCAACAAGCCGAAGGGGTTCCTCAGCTATACCAATGTCGCCGACAGCGGCTGGAGCTGGGGCAATATCGGCTATATCGCCACGGGCGCGGCCGGCGCCTTCAAGGCGAGCGGGCCGTCCGACACGCTGATCGACACGATCTATGCGCTGAAGGCGGGGCACCGGCAGAATGCCAGCTTCGTCATGAACCGCAAGACGCAGAGCGCGATCCGCAAGTTCAAGGATGCGGACGGCAACTACCTCTGGCGCCCGCCGGCAACGCCGGGCCAGGCGGCCTCGCTGATGGGCTTTGCCATCGCCGAGGCCGAGGACATGCCGGATGTGGCGGCCGACAGCGCCTCCATCGCCTTCGGCGATTTCCGCGCCGGCTATCTCGTCGTCGACCGCACGGGCGTTCGCGTGCTGCGAGATCCCTATTCGGCCAAGCCCTATGTGCTGTTCTACACCACCAAGCGCGTCGGCGGCGGGGTGCAGAACTTCGAGGCGATCAAGCTGGTGAAGTTCGCGGCGAGCTGA
PROTEIN sequence
Length: 298
MSVGSAADGGYLVPPETDTEIGRRLSAASPIRALATVRQVSGAVLKKPFATSGMACGWVAETASRPQTNAAQLAELSFPTMELYAMPAATAALLDDAAVDVESWIASEVDIVFGEQEGTAFVSGDGTNKPKGFLSYTNVADSGWSWGNIGYIATGAAGAFKASGPSDTLIDTIYALKAGHRQNASFVMNRKTQSAIRKFKDADGNYLWRPPATPGQAASLMGFAIAEAEDMPDVAADSASIAFGDFRAGYLVVDRTGVRVLRDPYSAKPYVLFYTTKRVGGGVQNFEAIKLVKFAAS*