ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6287_5

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 2781..3350

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003601E18 similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 189.0
  • Bit_score: 258
  • Evalue 4.90e-66
Phage protein PhiE125 gp8 family {ECO:0000313|EMBL:EYR81164.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 189.0
  • Bit_score: 297
  • Evalue 1.30e-77
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 184.0
  • Bit_score: 232
  • Evalue 1.20e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGACCATTGCCGAACTCTTGCCGCCGGCCGTGGAGCCGGTCACGCTCGCCGAGGTGAAGGCGCATCTGCGCCTCGATACGGACGACGAGGATGCGCTGCTTTCGGCGCTGGTCCGCACGGCGCGCCAATATATGGAGGCCGAGACGGGGCTTTGCCTGATCGTGCGGCTGCTGCGGCTCTATCTCGACGACTGGCCGGAGGGCAGGGTGATTCAGATTGCCAGAGGGCCGGTGCAAGCCATTGAAATGCTGACGGTCTACGATGATTTCGGCGCGCCGGTCGACGTGAATACGGCCGACTATGTCCTCGACGGCGCGGCGCGGCCGGCGCGGCTCATCCTGCCCGAACGGCCGGCGACGGCGCGGGCGATGAACGGCATCGAGATCGATTTCACCGTCGGCTTCGGCGAGAGCGGCGCGGATGTGCCGGATACGTTGAAGCGGGCGCTGCTGCTGCATGTCGCCGCCATGTTCGAGCTGCGCGGCGTGCTCGCCGCCGAGGATCAGCCGGGGGCGGTGCCGGAGGGTTACGACCGGCTCGTCTCGCCATATCGGCTCAGGAGGCTGTGA
PROTEIN sequence
Length: 190
MTIAELLPPAVEPVTLAEVKAHLRLDTDDEDALLSALVRTARQYMEAETGLCLIVRLLRLYLDDWPEGRVIQIARGPVQAIEMLTVYDDFGAPVDVNTADYVLDGAARPARLILPERPATARAMNGIEIDFTVGFGESGADVPDTLKRALLLHVAAMFELRGVLAAEDQPGAVPEGYDRLVSPYRLRRL*