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SCNpilot_expt_1000_bf_scaffold_6287_21

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 14404..14835

Top 3 Functional Annotations

Value Algorithm Source
Putative outer-membrane lipoprotein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EVC5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 144.0
  • Bit_score: 244
  • Evalue 5.60e-62
Putative outer-membrane lipoprotein {ECO:0000313|EMBL:EYR81179.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 144.0
  • Bit_score: 244
  • Evalue 7.80e-62
lipa1; 17 kDa surface antigen similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 142.0
  • Bit_score: 180
  • Evalue 5.30e-43

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
ATGAAGACGGGTTTGCGCGGCGCCTTTTTCCCCCTGCTTCTGGCAACAGCGACGGTTTCGGGATGCACGACCACATCGGGCGGCAAGGGCATGGCCGGCGGCGTGCTGCCGTCCGGCTCGCGCGCGGCCGTCTACATCACGGCGCTGCAGGGCGGCCTCGTGAGCCGCAATACGGCGGCGCAGCTTTCCAGGGCTGACATGCAGCGGGCGCTGGAAGCCGAATATCGCGCGCTGGAAGCCGCGCCCGGCGGCCAGCCGGTCGTCTGGCAGGGCAAGGGCGTCACCGGATCGGTCGTCGCGGCCGCGCCCTACCAGGTCGGCTCGCAGAATTGCCGGCAGTACAGCCACACGCTGACGGTCGAGGGACGCGACACCACGACCCGCGGTGCCGCCTGCCGCAACGCGGACGGCGCCTGGGCGCCGCTTTCCTGA
PROTEIN sequence
Length: 144
MKTGLRGAFFPLLLATATVSGCTTTSGGKGMAGGVLPSGSRAAVYITALQGGLVSRNTAAQLSRADMQRALEAEYRALEAAPGGQPVVWQGKGVTGSVVAAAPYQVGSQNCRQYSHTLTVEGRDTTTRGAACRNADGAWAPLS*