ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6287_24

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 16543..17250

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c-type biogenesis protein CcmF n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q217P1_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 236.0
  • Bit_score: 374
  • Evalue 1.00e-100
cytochrome c-type biogenesis protein CcmF; K02198 cytochrome c-type biogenesis protein CcmF similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 236.0
  • Bit_score: 374
  • Evalue 3.10e-101
Cytochrome c-type biogenesis protein CcmF {ECO:0000313|EMBL:ABD87395.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 236.0
  • Bit_score: 374
  • Evalue 1.40e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGATCGCCGAAACCGGCCACTACGCCCTCGCGCTCGCTCTCGTGATGGCGCTCGTGCAGATGATCGTGCCCGCCTGGGGTGCGCGCAGCGGCGACGTTGCGCTGATGCGCGTGGCTGGCTCGACCGCGGTCGCGCAATTCCTGCTCGTCGGCATCTCGTTCGCGGCACTCGCGTGGTGCTATCTCGTCTCCGATTTTTCGGTCGCGAATGTCTATGAGAATTCGCACTCCGCGAAACCGCTGATCTACAAGCTCACCGGCCTGTGGGGGAACCACGAGGGCTCGATGCTGCTGTGGGTTTTCATCCTCGCGCTGTTCGGCGCGATGGTGGCGCTGTTCAGCCGCAACCTGCCGCTCAGGCTGCGCGCCAATGTGCTGGCCGTGCAGGCGTCGGTCGCGGTCGCGTTCTATCTTTTCATCCTTTTCACCTCGAACCCGTTCACGCGCCTCTCGCCCGCGCCGTTCGAGGGGCGCGACCTCAATCCGGTGCTGCAGGATATCGGCCTCGCGGTGCATCCGCCGCTGCTCTATCTCGGCTATGTCGGCTTCTCGATCACCTTCTCGTTCGCGGCCGCTGCGCTGATCGAAGGGCGGATCGACGCCGCCTGGGCGCGCTGGGTGCGTCCGTGGACGCTCGCGGCCTGGATGTTCCTCACGCTCGGAATCGCGATGGGTTCCTACTGGGCCTATTACGAGCTTGGCTGGGGC
PROTEIN sequence
Length: 236
MIAETGHYALALALVMALVQMIVPAWGARSGDVALMRVAGSTAVAQFLLVGISFAALAWCYLVSDFSVANVYENSHSAKPLIYKLTGLWGNHEGSMLLWVFILALFGAMVALFSRNLPLRLRANVLAVQASVAVAFYLFILFTSNPFTRLSPAPFEGRDLNPVLQDIGLAVHPPLLYLGYVGFSITFSFAAAALIEGRIDAAWARWVRPWTLAAWMFLTLGIAMGSYWAYYELGWG