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SCNpilot_expt_1000_bf_scaffold_6420_1

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(2..514)

Top 3 Functional Annotations

Value Algorithm Source
aapP; general L-amino acid transport ATP-binding protein AapP (EC:3.6.3.21); K09972 general L-amino acid transport system ATP-binding protein [EC:3.6.3.-] similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 170.0
  • Bit_score: 309
  • Evalue 5.30e-82
General L-amino acid transport ATP-binding protein AapP n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBX9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 170.0
  • Bit_score: 311
  • Evalue 4.40e-82
General L-amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYR79980.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 170.0
  • Bit_score: 311
  • Evalue 6.20e-82

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGTCCGCTCAAACCGCCAAGGCGCCTGCCATCGGCACCGACGTCGCCATCGAGATGATCAAGGTCAGCAAGTGGTACGGCGAATTCCATGTGCTGCGCGACATCAACCTCAAGGTCATGAAGGGCGAGCGCATCGTCATCTGCGGACCCTCCGGCTCGGGGAAATCGACCTTGATCCGCTGCATAAACCGGCTGGAGGAGCACCAGAAGGGTCAGATTCTCGTCGACGGCATCGAGCTGACCAACGACCTGAAGAAGATCGACGAGGTGCGCCGCGAGGTCGGCATGGTGTTCCAGCACTTCAACCTCTTCCCGCACCTGACGATCCTGGAAAACTGCACACTCGCGCCGATCTGGGTGCGCAAGATGCCCAAGAAGGAAGCCGAGGAGGTCGCGATGCACTACTTGAAGCGCGTCAAGATCCCCGAGCAGGCCCACAAATATCCCGGCCAGCTCTCGGGCGGCCAGCAGCAGCGCGTGGCGATCGCCCGCTCGCTGTGCATGAAGCCGAAG
PROTEIN sequence
Length: 171
MSAQTAKAPAIGTDVAIEMIKVSKWYGEFHVLRDINLKVMKGERIVICGPSGSGKSTLIRCINRLEEHQKGQILVDGIELTNDLKKIDEVRREVGMVFQHFNLFPHLTILENCTLAPIWVRKMPKKEAEEVAMHYLKRVKIPEQAHKYPGQLSGGQQQRVAIARSLCMKPK