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SCNpilot_expt_1000_bf_scaffold_6423_5

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 4993..5199

Top 3 Functional Annotations

Value Algorithm Source
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 49.0
  • Bit_score: 99
  • Evalue 1.90e-18
garS; phosphoribosylaminoimidazole synthetase; K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 49.0
  • Bit_score: 96
  • Evalue 2.80e-18
phosphoribosylaminoimidazole synthetase n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00036847C4 similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 49.0
  • Bit_score: 96
  • Evalue 9.00e-18

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGAGCCAGTCGGAAAAGAACGGTCTGACCTACAGCGATGCGGGCGTCGACATCGACGCGGGCAACCTGATGGTCGAGAAGATCAAGCCGGCGGTGCGCTCCACGCGCCGCCCCGGCGCGGACGGCGAGATCGGCGGCTTCGCAGGGCCGCCGGCTTCAAGGATCCGGTGCTCGTGGCCGCCAACGACGGCGTCGGCACCAAGCTGA
PROTEIN sequence
Length: 69
MSQSEKNGLTYSDAGVDIDAGNLMVEKIKPAVRSTRRPGADGEIGGFAGPPASRIRCSWPPTTASAPS*