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SCNpilot_expt_1000_bf_scaffold_6423_14

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(13545..14438)

Top 3 Functional Annotations

Value Algorithm Source
Putative DNA ligase Lig {ECO:0000313|EMBL:EYR80818.1}; EC=6.5.1.1 {ECO:0000313|EMBL:EYR80818.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 297.0
  • Bit_score: 573
  • Evalue 1.50e-160
Putative DNA ligase Lig n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQX6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 297.0
  • Bit_score: 573
  • Evalue 1.10e-160
ATP-dependent DNA ligase similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 296.0
  • Bit_score: 500
  • Evalue 4.80e-139

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
CGCCGCCTCTATTCCCGCTCCGGCGATGATATCTCCGCCGCCTTTCCCGATGTGCTCGACGCGATCAACTTCGAGGGCGTGGTGGATGGCGAGCTGCTGGTCGGCGGCACGGCCCGCACGAACAGCCCGACGCGCACCTTTTCCGACCTCCAGCAGCGCCTCAACCGGAAAACCGTCACCGCGCGCATGCTGGAAGACTATCCCGCCTTCGTGCGGGCCTATGACGTGCTCTTCGACGGCGACGGGGATGTGCGTCCCGAAGGCTTTTCCGCTCGCCGCGCCCGCCTCGGCGCGATCATCGAAAGGGCGCCGCACGACCGCTTCGACCTCTCCCCGCTCGTGCCCTTCGGCTCCTGGGCGCAGCTGGAGCAGATCCGCCGCGAGCCGCCCGATCCGGTCATCGAGGGCGTGATGATCAAGCGCCTCGACAGCACCTACCAGGCCGGCCGCATGAAGGGGCCGTGGTTCAAGTGGAAGCGCGACCCCTACAATATCGATGCCGTGATGATGTATGCCCAGCGCGGCCACGGCAAGCGCTCCAGCTACTATTCCGACTTCACCTTCGGCGTGTGGACGCAAGGCGAGGGCGGCGACGTGCTGGTGCCCGTAGGCAAGGCCTATTTCGGCTTCACCGATGCCGAGCTCGAAGTGCTCGACCGCTATGTGCGCAACAACACGACCGAGCGCTTCGGCCCGGTGCGGGCCGTGCGCGCCGAGCCCGGTTACGGCTTCGTGCTGGAGGTCGCCTTCGAGGGCATCAACCGCTCCACCCGCCACAAGTCCGGCGTCGCCATGCGCTTCCCCCGCATCGCCCGCCTGAGGCAGGACAAGCTGCCGGCCGATGCCGACCGGCTGGAAACGCTGATGGCGATGGTGGAGGCGAAGGACGTCTAG
PROTEIN sequence
Length: 298
RRLYSRSGDDISAAFPDVLDAINFEGVVDGELLVGGTARTNSPTRTFSDLQQRLNRKTVTARMLEDYPAFVRAYDVLFDGDGDVRPEGFSARRARLGAIIERAPHDRFDLSPLVPFGSWAQLEQIRREPPDPVIEGVMIKRLDSTYQAGRMKGPWFKWKRDPYNIDAVMMYAQRGHGKRSSYYSDFTFGVWTQGEGGDVLVPVGKAYFGFTDAELEVLDRYVRNNTTERFGPVRAVRAEPGYGFVLEVAFEGINRSTRHKSGVAMRFPRIARLRQDKLPADADRLETLMAMVEAKDV*