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SCNpilot_expt_1000_bf_scaffold_6436_4

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 4105..5049

Top 3 Functional Annotations

Value Algorithm Source
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 314.0
  • Bit_score: 555
  • Evalue 4.50e-155
leuS; leucine--tRNA ligase (EC:6.1.1.4) similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 314.0
  • Bit_score: 497
  • Evalue 3.30e-138
Leucine--tRNA ligase n=2 Tax=Rhizobium meliloti RepID=K0P347_RHIML similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 314.0
  • Bit_score: 497
  • Evalue 1.00e-137

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGCAGGTGGCCGGCCATCTCGACCTGAAGGAGCCCTTCAAGGGCCTCTTCACGCAGGGCATGGTCGTGCACGAGACCTATAGCCGCGCCGTCGACGGCAAGCGCGAATGGGTGATGCCGGCGGAAATCCGCATCGAGGAAGTCGACGGCAAACGCCGCGCGACCCATCTCGAATCCGGCGAAGAAATCGCCATCGGCTCCATCGAGAAGATGTCGAAGTCGAAGAAGAACGTCGTCGACCCGGACGATATCATCGCCTCCTACGGCGCCGATACCGCCCGCTTCTTCGTCCTCTCCGATTCCCCGCCGGACCGTGACGTCATCTGGTCGGAAGCCGGCGTCGAGGGCGCCCACCGCTTCGTCCAGCGCGTCTGGCGCCTCATCGCCGAAGCCGCTCCCGCCCTCAAGGCAGCCGAAGCCCGTCCGGGCACGGAAGGCGAGGCGCTCGCCGTCTCGCAGGCCGCGCACAGGACGCTGAAGGCCGTGCAGGGCGACTATGACAAGCTCGCCTTCAACAAGGCCGTGGCGCGCATCTACGAATTCGTCAATGCGCTCGCCGCGCCGCTCACGACGGCCGCCGCCGGCAAGGCGTCGCCCGACCTTGCCGCCGCGCTGCGCGAGGCCGTCGGCATCCTGATCCGCATCGTCGCCCCGATGACGCCCCACCTTTCGGAAGAATGCTGGCGCGAGATCGGCGGCGAGGGCCTCGTCGCCGACACCGCCTGGCCGGCCTATGACGACCGGCTGGTGGCGGAAAACGAGGTCACGCTGCCGGTGCAGATCAACGGCAAGAAGCGCGCGGATTTGACAATCGCCCGCGACGCAGACCAGAGTGCGGTCGAAGAGGCCGTGCTCGCACTCGAGGCGGTCCAGGCCGCGCTCGGCGGCCAGCGTCCCAAGAAGATCATCGTCGTACCGCAGAGGATCGTGAATGTTGTTGTCTGA
PROTEIN sequence
Length: 315
MQVAGHLDLKEPFKGLFTQGMVVHETYSRAVDGKREWVMPAEIRIEEVDGKRRATHLESGEEIAIGSIEKMSKSKKNVVDPDDIIASYGADTARFFVLSDSPPDRDVIWSEAGVEGAHRFVQRVWRLIAEAAPALKAAEARPGTEGEALAVSQAAHRTLKAVQGDYDKLAFNKAVARIYEFVNALAAPLTTAAAGKASPDLAAALREAVGILIRIVAPMTPHLSEECWREIGGEGLVADTAWPAYDDRLVAENEVTLPVQINGKKRADLTIARDADQSAVEEAVLALEAVQAALGGQRPKKIIVVPQRIVNVVV*