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SCNpilot_expt_1000_bf_scaffold_6436_5

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 5036..5560

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCZ4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 174.0
  • Bit_score: 269
  • Evalue 3.30e-69
Uncharacterized protein {ECO:0000313|EMBL:EYR78849.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 174.0
  • Bit_score: 269
  • Evalue 4.70e-69
hypothetical protein; K03643 LPS-assembly lipoprotein similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 176.0
  • Bit_score: 202
  • Evalue 9.30e-50

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGTTGTTGTCTGACGGAACCGGCCTCTCGCGGCTCGCCAAGGCGCTTGCCGGCATCGCCCTTGTCGGCGTGCTGGCCGGCTGCCAGGTGCGCCCGCTCTATTCCACCGACGCCGGCACCGAGGCCAAGCTGGCCTCCGTCTCCATTTCGGAGGCGGACGACCGGGTGGAGCAGCAGGTCCGCAACGACCTGGTCTTCCTCTTCACCGGCGGCGGCGGCGAAGCGCAGTCCGCGGCCTATCATCTGGAGATGGACGTGAACGTACGGACCATCGGCGTCCTCACCGACGTCGTGAAGGACAGAGCACGCGCCGGCCGCGTCACCGTCTCGGCGGACTACAATCTGACGATGGCCGACACCGGCGAGACATTGGCATCCGGCAAGCGCTCCGCCGTCGCCATGGTCGATTTTCCGACGCAGGAATTCGCAAAGCTGCGAGCCATCCGGGATGCGGAGAACCGCGGCGCCCGCGAGCTTGCAGAACTGATCCGCGCGGACGTCGCAGCAGCCCTCGCCCGGCGCTGA
PROTEIN sequence
Length: 175
MLLSDGTGLSRLAKALAGIALVGVLAGCQVRPLYSTDAGTEAKLASVSISEADDRVEQQVRNDLVFLFTGGGGEAQSAAYHLEMDVNVRTIGVLTDVVKDRARAGRVTVSADYNLTMADTGETLASGKRSAVAMVDFPTQEFAKLRAIRDAENRGARELAELIRADVAAALARR*