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SCNpilot_expt_1000_bf_scaffold_6436_12

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(10949..11158)

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 69.0
  • Bit_score: 102
  • Evalue 1.80e-19
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 69.0
  • Bit_score: 91
  • Evalue 1.20e-16
tRNA modification GTPase MnmE n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MB67_RHISN similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 69.0
  • Bit_score: 91
  • Evalue 3.80e-16

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
TTGGCTCTACCCACACGCCGGCGCCATGTCGCCAATCTTGTGGAAGCAAAAGAGCATATTGCCAGGGCAATCGCGTCCGGGGGTGCGGGCCTGGATATCCAGGCGGAGAATTTGCGCCTGGCGGGCGTTGCGCTCGGTCGGGTGACCGGACGCGTCGATGTCGAGAATCTTCTCGACGTCATCTTTTCCGAATTCTGTATAGGCAAATGA
PROTEIN sequence
Length: 70
LALPTRRRHVANLVEAKEHIARAIASGGAGLDIQAENLRLAGVALGRVTGRVDVENLLDVIFSEFCIGK*