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SCNpilot_expt_1000_bf_scaffold_6380_3

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 1024..1140

Top 3 Functional Annotations

Value Algorithm Source
Beta-lactamase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGR2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 38.0
  • Bit_score: 82
  • Evalue 1.30e-13
Zn-dependent hydrolase {ECO:0000313|EMBL:EYR79363.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 38.0
  • Bit_score: 82
  • Evalue 1.80e-13
beta-lactamase similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 38.0
  • Bit_score: 70
  • Evalue 1.60e-10

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 117
ATGGAACGGCTCCTGACCCTGCCCGTGCGGCTGGTGCATGGCGGCCATTTTCCAAGCTTCGGCGGGGAACGCTATCGCCAGCTCATCCGGGGCTGGCTCGACGAAAAACAGAAGTGA
PROTEIN sequence
Length: 39
MERLLTLPVRLVHGGHFPSFGGERYRQLIRGWLDEKQK*