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SCNpilot_expt_1000_bf_scaffold_6380_5

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 2973..3737

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Rhizobium giardinii RepID=UPI00037594AE similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 256.0
  • Bit_score: 349
  • Evalue 3.70e-93
Putative permease, DMT superfamily {ECO:0000313|EMBL:EYR79361.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 254.0
  • Bit_score: 406
  • Evalue 2.10e-110
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 256.0
  • Bit_score: 343
  • Evalue 6.40e-92

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGGCCACGGCCTTCTGGCGCGTCTCGCTCGCGCTGCTGCCCTTCTTCCTGATGTCGCGGATGGCACGGCAGGGCGACCAGACGCCGGCCGGCCTGCGCGACCATCTCCTGCTGCTGCTGCCGGGCGTGTTCCTGGCGCTCGACCTTGCCGCCTGGCACCTGTCGCTGCACATGACCTCCGTCGCCAATGCGACGCTGCTCGCCAACCTCGCGCCCGTCTTCGTCACGCTCGGCTCCTGGCTGGTCTTCCGCACGCGCATCACCCCGATCTTCCTCAGCGGGCTTGCGCTGGCGCTTGCCGGCGTCATCGTCCTGAAGGGCGGGCCGGCGGCCATAAGCGGCGGGCAGCTCGCGGGCGACGCCACGGCGATCGTCGCGGCCTTCTTCTATGCCTGCTACATGCTCTCGCTCGGGCATGGTCGCGCGCGCTTCTCCACGCTGCGCATCATGGTCTGGACGCCCCTCTCGGCTGCCGTCTGCATGCTGCCAGCCGCCTTCTTCCTGGAAGGCAGCATGCTGCCGGCAACGCTTTTCGGCTGGTCCATGCTCTTCGGCCTCGCCTTCATCAGCCATGTCGGCGGACAGGGCCTCGTGACCTATGCGCTCGCCTACCTGCCGACGGCGTTCTCCTCGCTGACGCTGCTGCTCCAGCCGGTCGTCGCCGCCATCCTCGCCTGGGTCCTGCTCGCCGAGCCGGTCGGCATGACCCAGGCTGTCGGCGGTGCGATCGTCCTGCTCGGCATCCTCGTCGCCCGCAGGGGATAA
PROTEIN sequence
Length: 255
MATAFWRVSLALLPFFLMSRMARQGDQTPAGLRDHLLLLLPGVFLALDLAAWHLSLHMTSVANATLLANLAPVFVTLGSWLVFRTRITPIFLSGLALALAGVIVLKGGPAAISGGQLAGDATAIVAAFFYACYMLSLGHGRARFSTLRIMVWTPLSAAVCMLPAAFFLEGSMLPATLFGWSMLFGLAFISHVGGQGLVTYALAYLPTAFSSLTLLLQPVVAAILAWVLLAEPVGMTQAVGGAIVLLGILVARRG*