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SCNpilot_expt_1000_bf_scaffold_7470_7

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(5808..7418)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination/antitermination protein NusA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D373_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 536.0
  • Bit_score: 1005
  • Evalue 1.50e-290
  • rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 536.0
  • Bit_score: 1005
  • Evalue 2.20e-290
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 538.0
  • Bit_score: 969
  • Evalue 3.80e-280
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1611
ATGGCAGTCAGTGCGAACCGGCTTGAGCTTCTGCAGATCGCGGATGCCGTGGCCCGTGAAAAGGTCATCGACCGCGAGATCGTGCTTGCCGCGATGGCCGACGCCATCCAGAAGGCGGCCCGCTCGCGTTACGGCACGGAATCCAACATCCGCGCCGACATCAATTCCAAGACCGGCGAAATCCGCCTCCAGCGCCTGCTGGAAGTCGTCGAGCATGCCGAGGACTATTCCACCCAGATCCCGCTGGAACTGGCGCGCGACCGCAACCCGGATGCCAAGCTCGGCGACTTCATCGCCGACCCGCTGCCGCCGATGGATTTCGGCCGCATCGCCGCCCAGTCGGCCAAGCAGGTCATCGTGCAGAAGGTGCGCGAGGCTGAGCGTGACCGCCAGTACGACGAATACAAGGACCGCATCGGCGAGATCGTCAACGGCACGGTCAAGCGCGTCGAATACGGCAACGTCATCGTCGACCTCGGCCGCGGCGAAGGCATCATCCGCCGCGACGAGATGATCCCGCGCGAGAACATGCGCTACGGCGACCGCGTCCGCGCCTATGTCTACGACGTGCGCCGCGAGCAGCGCGGCCCGCAGATATTCCTGTCGCGCACCCATCCGCAGTTCATGGTGAAGCTCTTCACCATGGAAGTGCCGGAAATCTACGACGGCATCATCCAGATCAAGTCGGTCGCCCGCGACCCGGGCTCGCGCGCCAAGATCGCCGTCATCTCGAACGACTCGTCCATCGATCCGGTCGGTGCCTGCGTCGGTATGCGCGGCTCGCGCGTCCAGGCCGTCGTCGGCGAGTTGCAGGGCGAGAAGATCGACATCATTCCGTGGAGCCAGGACCCGGCCTCCTTCATCGTCAACGCCCTGCAGCCGGCGGAAGTCGCCAAGGTCGTTCTGGACGAGGATGCCGAGCGCATCGAAGTGGTCGTTCCGGATGAGCAGCTCTCGCTCGCCATCGGCCGCCGCGGCCAGAACGTGCGCCTCGCCTCGCAGCTCACCGGCTGGGATATCGACATCCTGACGGAGGCCGAGGAGTCCGAGCGCCGCCAGAAGGAATTCAACGAGCGCACCAACCTCTTCATGGACTCGCTCGACGTCGACGAGATGGTCGGCCAGGTCCTGGCTTCCGAAGGCTTTTCCGCCGTCGAGGAACTGGCCTATGTCGATCTCGACGAAATCGCCTCCATCGACGGCTTCGACGAGGACACGGCCCAGGAAATCCAGACCCGCGCCCGTGAATATCTCGAGCGCATCGAGGCCGAGATGGACGCCAAGCGCAAGGAACTCGGCGTTTCCGACGAACTGCGCCAGATCGACGGCATGACGGGCCAGATGCTCGTCGCCCTCGGCGAGGACGGCATCAAGACGATGGAAGACTTCGCGGGCTGCGCGGCCGACGACCTCGTCGGCTGGTCGGAGCGCAAGGACGGCGAGACGAAGAAGTTCGAGGGTCTCTTCTCGAAGCTCGAGGTCTCCCGCGCCGAGGCCGAGGCCATGATCGTGCAGGCCCGCCTTGCGGCCGGCTGGATCACGGAAGAGGACCTCGCCACCGAGGAAGAGGCTGTGGAAGGTGCCGTGGAAGGCGCCGAGCAGGACGCCTGA
PROTEIN sequence
Length: 537
MAVSANRLELLQIADAVAREKVIDREIVLAAMADAIQKAARSRYGTESNIRADINSKTGEIRLQRLLEVVEHAEDYSTQIPLELARDRNPDAKLGDFIADPLPPMDFGRIAAQSAKQVIVQKVREAERDRQYDEYKDRIGEIVNGTVKRVEYGNVIVDLGRGEGIIRRDEMIPRENMRYGDRVRAYVYDVRREQRGPQIFLSRTHPQFMVKLFTMEVPEIYDGIIQIKSVARDPGSRAKIAVISNDSSIDPVGACVGMRGSRVQAVVGELQGEKIDIIPWSQDPASFIVNALQPAEVAKVVLDEDAERIEVVVPDEQLSLAIGRRGQNVRLASQLTGWDIDILTEAEESERRQKEFNERTNLFMDSLDVDEMVGQVLASEGFSAVEELAYVDLDEIASIDGFDEDTAQEIQTRAREYLERIEAEMDAKRKELGVSDELRQIDGMTGQMLVALGEDGIKTMEDFAGCAADDLVGWSERKDGETKKFEGLFSKLEVSRAEAEAMIVQARLAAGWITEEDLATEEEAVEGAVEGAEQDA*