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SCNpilot_expt_1000_bf_scaffold_7470_13

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(11593..12198)

Top 3 Functional Annotations

Value Algorithm Source
Recombination protein RecR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EZ78_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 201.0
  • Bit_score: 390
  • Evalue 1.10e-105
  • rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 201.0
  • Bit_score: 390
  • Evalue 1.60e-105
recR; recombination protein RecR; K06187 recombination protein RecR similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 201.0
  • Bit_score: 376
  • Evalue 4.10e-102
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGCAAAACGAGTCACCGGCCCCGAAATCGAAAAACTCATCCAGCTTCTGGCGAAGGTGCCGGGCCTCGGGCCCCGCTCGGCCCGCCGTGCGGCGCTGCATCTCGTCAAGAAGAAGGACCAGCTTCTCGGCCCCCTCGCCGAGGCGATGGGCGAGGCGCATCGCAAGGTGCGCATCTGCTCCTGCTGCGGCAATGTCGATACCAGCGATCCCTGCACGGTCTGCACGGATGTGCGGCGCGACCAGTCGGTCATCATCGTCGTCGAGGACGTCTCCGACCTCTGGGCGCTGGAGCGCGCCGGGGCGATGAACGCGGCCTACCACGTTCTCGGCGGCACGCTCTCGCCGCTCGACGGCGTCGGGCCTGATGATCTCAACATCCGCGGCCTCGTCGACCGGGTGGCGAAAGGGGACGTGCGCGAGCTGATAATCGCCGTCAACGCGACCGTCGAGGGCCAGACGACGGCGCATTACATCACCGACCAGCTCTCCGGCCTCGACGTGAAGATCACGCGGCTCGCCCATGGCGTGCCCGTCGGCGGCGAGCTCGACTATCTCGACGAAGGCACCCTGACGGCGGCGCTGCGCGCCCGCACGGCGATCTGA
PROTEIN sequence
Length: 202
MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLVKKKDQLLGPLAEAMGEAHRKVRICSCCGNVDTSDPCTVCTDVRRDQSVIIVVEDVSDLWALERAGAMNAAYHVLGGTLSPLDGVGPDDLNIRGLVDRVAKGDVRELIIAVNATVEGQTTAHYITDQLSGLDVKITRLAHGVPVGGELDYLDEGTLTAALRARTAI*