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SCNpilot_expt_1000_bf_scaffold_7470_17

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(13870..15651)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III, subunits gamma and tau {ECO:0000313|EMBL:EYR84161.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EYR84161.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 596.0
  • Bit_score: 1032
  • Evalue 0.0
dnaX; DNA polymerase III subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 596.0
  • Bit_score: 885
  • Evalue 1.10e-254
DNA polymerase III subunit gamma/tau n=1 Tax=Rhizobium giardinii RepID=UPI000367105E similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 604.0
  • Bit_score: 896
  • Evalue 1.50e-257

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1782
ATGGTCGGCCAGGAGCCGATGGTCCGCACGCTGACCAACGCCTTCGAGACCGGCCGCATCGCCCAGGCCTACATGCTGACCGGCGTGCGCGGCGTCGGCAAGACGACGACCGCCCGCATCCTCGCCCGCGCGCTGAACTACAAGACGCCGGAGATCGACAAGCCGACCATCGATCTTCGCGTGCCCGGCGAGCATTGCCAGGCGATCATGGAAGGCCGCCATGTCGACGTCATCGAGATGGACGCCGCCTCCCATACCGGCATCGACGACATCAGAGAGATCATCGAGCAGGTGCGCTACCGCCCCGTCTCGGCGCGCTACAAGGTCTATATCATCGACGAAGTGCACATGCTCTCGATGCAGGCCTTCAACGGCCTCTTGAAGACGCTGGAAGAGCCGCCGGAGCATGTGAAGTTCATCTTCGCGACGACGGAGATCCGCAAGGTTCCGATCACCGTCCTGTCGCGCTGCCAGCGCTTCGACCTGCGCCGCATCGGCGCGTCGGATCTCGTCGGCCTCTTCACCACCATCCTCGGCAAGGAAGGCGTCGAGTTCGAGCCGGACGCGCTCGCCATGGTCGCCCGCGCGGCCGAGGGCTCGGCCCGCGACGGCCTGTCGCTGCTCGATCAGGCGATCGCCCATGGCGCGGGCCGTGTCGAGGTGGAGGCCGTGCGCTCCATGCTCGGCCTTGCCGACCGCGCCCGCATCGTCGACCTCTTCGAACACATCGTGAAGGGCGACGCGGCAGCGGCGCTGGCCGAGTTCGCCGCACAGTACGAGGCAGGCGCCAGCCCCTCCGTCGTGCTGACGGACCTTGCCGATTTCACCCATCTCGTCACTCGCATGAAATATGTGCCCGACGCTGCCGGCGACCAGTCGCTGAGCGAGATCGAGCGCACGCGCGGCGTCGAGTTCGCCAATTCCATCGCCGTCACCGCGCTTTCGCGCATGTGGCAGATGCTGCTGAAGGGCATCCCGGAAACGGAAGCCTCCAGCCGCCCGGCGGGCGCCGCCGAGATGGTCATCATCCGCCTTGCCCACGCCGCCAACCTTCCCTCGCCGGAAGAGGCCGCGCGCCGGCTCGCCGAGCTTTCGAGCGGCGAGGGTGGCGGCAATGGCGGCCGCGCGCCGCAATCCGGCGGTTCTTCCGGCCAGCCCTCGGCGCAGGCGTCCGTTTCCGCCGTCGCACGCCAGCCGGATGCGCCGCTGCGCGCCCAGTCGAACGGCGCGACCATGCTGCGCGCCGTGCCGCAGGCCGAGCCGACGCCCCAGCCCGTCGGCCGCACCGAGGCCGCTCCCGCCGAACAGCCGGCAGCAACGCCGAAAGTGCCGGTCAATTCGCTCTCCGACATCGCCGATCTCTGCACGAAGAACCGCGACATCCGCCTGCGCGCCCTCGTGCGTGCCTTTGTCCGCCCCGTGAGCGTCGAGCCCGGCAAGCTGGAAATCGGCCTTGCCCCGGATGCGCCGAAATCGCTCGTCGCCGATCTCCAGAACCGGCTCGTCGAATGGACAGGCATGCGCTGGCTGGTCATCCTGTCACGCGAAGCCGGCGGGCCGACCCTGTCGGAAGCCGAAACCATGGCGCAGGAAGCGCGCGTCGCCGATGCCCGCCAGGACCCCGACGTCGCCGCCATCCTGCAGCGCTTCCCCGGTGCGAAGATCACCGACGTGCGCATCAAGGTGCAGGAAACGGAAGACGAGGCCGAGACCGTCGAGGTCGTGGCCGCCGCCGAATCCGCCGAGGGCGACATCCTGCCCGGCGACGATATCGAACATTAA
PROTEIN sequence
Length: 594
MVGQEPMVRTLTNAFETGRIAQAYMLTGVRGVGKTTTARILARALNYKTPEIDKPTIDLRVPGEHCQAIMEGRHVDVIEMDAASHTGIDDIREIIEQVRYRPVSARYKVYIIDEVHMLSMQAFNGLLKTLEEPPEHVKFIFATTEIRKVPITVLSRCQRFDLRRIGASDLVGLFTTILGKEGVEFEPDALAMVARAAEGSARDGLSLLDQAIAHGAGRVEVEAVRSMLGLADRARIVDLFEHIVKGDAAAALAEFAAQYEAGASPSVVLTDLADFTHLVTRMKYVPDAAGDQSLSEIERTRGVEFANSIAVTALSRMWQMLLKGIPETEASSRPAGAAEMVIIRLAHAANLPSPEEAARRLAELSSGEGGGNGGRAPQSGGSSGQPSAQASVSAVARQPDAPLRAQSNGATMLRAVPQAEPTPQPVGRTEAAPAEQPAATPKVPVNSLSDIADLCTKNRDIRLRALVRAFVRPVSVEPGKLEIGLAPDAPKSLVADLQNRLVEWTGMRWLVILSREAGGPTLSEAETMAQEARVADARQDPDVAAILQRFPGAKITDVRIKVQETEDEAETVEVVAAAESAEGDILPGDDIEH*