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SCNpilot_expt_1000_bf_scaffold_7483_1

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 2..1171

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D222_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 386.0
  • Bit_score: 676
  • Evalue 1.20e-191
  • rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EYR78087.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 386.0
  • Bit_score: 676
  • Evalue 1.70e-191
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 386.0
  • Bit_score: 564
  • Evalue 3.50e-158

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
AAGCCGCCCTTGAAGCTTTCGGCGGAAACGCCAAAGGCGCGGGCGGTCGATCCGTTCTGGGTGTCGCGCCAGGCGCTCGATGCGGACGAAGCCGTGCTCAAGCCCGGCTGCGGCTGGCTGCCGGCGGACTGGATGCCGGACGAGGCGCTGCGCCGCGCCATCCGCAGCCTCGCCCGCAGCGACAGCGACGTCCTTGCCTATTACGGCAGCACGCGCGGTTCGCCCGCCCTTCGCCGCCTGCTGCTCGGCCGGCTGGCCGAGGACGGCATCGAGGCGGGGCCGGACAACCTCATGCTGACCAATACGGGTACGCAGGCGCTCGACCTGATCTGCCGCTTCCTGCTGCGGCCGGGCGATACGGTGCTGGTCGACGACCCCTGCTATTTCAATTTCCAGGCCCTCCTGAAGGCGCACGAGGTGACCGTGGTCGGCGTGCCGTACAGCCCGTCCGGCCCCGACGTCGCCGCCTTCGAGGCCGTGCTCGGCGCGCAGCGCCCGCGGCTCTACATCACCAATTCGGCGATCCACAACCCGACCGGCGCGACGATCTCGCCGCAGGTGGCACACCGGTTGCTGAACGCTGCCGCGGGCAGCGACATGACCATCATCGAGGACGAGATCGTCGCCGATTTCGAACCGGAGCCCTCCACAAGGCTCGCCGCGCTCGACGGGCTTTGCCGCGTCATCCGCATCGGCAGCTATTCCAAGACGCTCTCCGCCTCGGCGCGCTGCGGCTACATCGCCGCCCGGCCGGACTGGATCGAGGGGCTGGTGGACCTGCAGATCGCCACCAATTTCGGCGGCCCGAACCCCATCTCCGCCGAGATCATCGCCCACATGCTGTCCGGCGGGGGCTACCGCAAGCACATGGAGGAGCTGCGGCGCCGGCTCGTCCGCACGCGGCGCGAGACGGTGGAGCGGCTGCACAGGCTCGGCATCGAGCCGTGGCTGCTGCCGCGCGGCGGCTTCAATCTCTGGTGCCGGCTGCCGGAGGGGCTCGATTCCGCCCTCGTGGCGCAGGCCGCCGTCGCCGAGGGCGTCGTGCTCGCCCCCGGAAACGTCTTCAGCCTCTCGCAAGGCGCCGCCGGTTTCATGCGCTTCAACGTCGCCCACATGCAGGAGCCGCGGGTCTACGAGGTTCTTGCAAGAGCCATGAAGGCGACGCCCTGA
PROTEIN sequence
Length: 390
KPPLKLSAETPKARAVDPFWVSRQALDADEAVLKPGCGWLPADWMPDEALRRAIRSLARSDSDVLAYYGSTRGSPALRRLLLGRLAEDGIEAGPDNLMLTNTGTQALDLICRFLLRPGDTVLVDDPCYFNFQALLKAHEVTVVGVPYSPSGPDVAAFEAVLGAQRPRLYITNSAIHNPTGATISPQVAHRLLNAAAGSDMTIIEDEIVADFEPEPSTRLAALDGLCRVIRIGSYSKTLSASARCGYIAARPDWIEGLVDLQIATNFGGPNPISAEIIAHMLSGGGYRKHMEELRRRLVRTRRETVERLHRLGIEPWLLPRGGFNLWCRLPEGLDSALVAQAAVAEGVVLAPGNVFSLSQGAAGFMRFNVAHMQEPRVYEVLARAMKATP*