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SCNpilot_expt_1000_bf_scaffold_7483_2

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 1214..2107

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CEC65B related cluster n=1 Tax=unknown RepID=UPI0003CEC65B similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 291.0
  • Bit_score: 402
  • Evalue 3.30e-109
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 284.0
  • Bit_score: 462
  • Evalue 4.90e-127
DNA repair protein similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 289.0
  • Bit_score: 398
  • Evalue 1.50e-108

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGCCGGCATTCCTCCCGCATTCGAACGGGAGTGTGACGGTGGCGCCGAGAGCGAACTGGAAAGGTTTCCTGAAGGTGGGCGAACTGGTGTGCCCGGTCGCGCTCTATACCGCCGCCTCGACGAGCGAGCGCATCTCCTTCCACATGCTCAACCGCCGCACCGGCCACCGGCTGCACCGCGAATTCGTCGACAGCGAGACGGGCAAGGTGGTGGAGCGCGAGGACCAGGTGAAGGGCTACGAGGCCGGCGAGAACGACTATATCGTGCTCGATGCCGAGGAGGTCGCCTCGGCAGTACCGGAGAGCGACAAGACGATGGACATTGCCGCCTTCATCACCTGCGGCGAGATCGACGACCTCTATTTCGACAAGCCCTATTATCTTGCCCCGTCCGACCGCCACGGGCAGGAAGCCTTCGCGCTGATCCGCGAGGGCATGAAGGCGCGGAACGTTGCGGCGCTGGCCGAGACGGTGCTGTTCCGCCGCGTCCGCACGCTCATCATCCGCCCGCATGGCGAGGGCCTCGTCGCGACCACGCTCAATTACGACTACGAGGTGCGCTCGGCCGACAAGGCCTTTGCCGACATTCCCGCCATCAAGCTCAAGGGCGAGATGCTGGAGCTTGCCGAGCACATCATCGGCACGAAAAGCGGCCGCTTCGATCCCAAGGCTTTCGATGACCGTTACGACGCCGCGCTCGCCGAGGTGGTCAAGGCGAAGATAGAGGGCCGCAAGATCAAGCCGGTGAGGCCGAAGGCCGAAGGCAAGGTCGTCGACCTCATGGAAGCGCTGCGCCAGAGCGCCGGCAAGGACGCCAAGCCCAAGAAGAGTGCCAGCGCGAAGAAGGCCGCACCGGCGCGCAAGCCCGCGGCTAGCCGGCGGAAGGTAGGGTGA
PROTEIN sequence
Length: 298
MPAFLPHSNGSVTVAPRANWKGFLKVGELVCPVALYTAASTSERISFHMLNRRTGHRLHREFVDSETGKVVEREDQVKGYEAGENDYIVLDAEEVASAVPESDKTMDIAAFITCGEIDDLYFDKPYYLAPSDRHGQEAFALIREGMKARNVAALAETVLFRRVRTLIIRPHGEGLVATTLNYDYEVRSADKAFADIPAIKLKGEMLELAEHIIGTKSGRFDPKAFDDRYDAALAEVVKAKIEGRKIKPVRPKAEGKVVDLMEALRQSAGKDAKPKKSASAKKAAPARKPAASRRKVG*