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SCNpilot_expt_1000_bf_scaffold_8827_2

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 576..1226

Top 3 Functional Annotations

Value Algorithm Source
L-sulfolactate dehydrogenase ComC {ECO:0000313|EMBL:EYR78355.1}; EC=1.1.1.337 {ECO:0000313|EMBL:EYR78355.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 216.0
  • Bit_score: 394
  • Evalue 7.00e-107
L-sulfolactate dehydrogenase ComC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVV3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 216.0
  • Bit_score: 394
  • Evalue 5.00e-107
  • rbh
malate/L-lactate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 217.0
  • Bit_score: 161
  • Evalue 2.90e-37

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGGTGACGATCACCGCCAGCACGCCGACCGAGGCCGTCGTGGTGCCGCATGGCGGATTGAGCCGGGTCTTTTCCTGCAATCCGATCGCCGCCGGCATCCCGACGGACCGGGACCCCATCCTCATCGACACGACGGCGGCGATGTCCGCGCTGGGACCGCTCAACCGCAGCTACCGGCTCGGCCAGACGCTGCCGGCGCCCCTGATCGTCGCGCAGGACGGCAGGGTCACGGACGATCCCGCCGAATTCGTCGAACGGGGCGGCGGTATCCTGCCCATCGGCGGCACCGAACAGGGCTACAAGGGCTTCAGCCTTGCCCTCCTCACCGAAGCCCTTTCCGGTGCGCTCGGCGGCTTCGGCCGTGGCTCACAGACCGGCGACAGCGAGGCGAACGGCGTCTTCGTGCAGGCCATCGACCCCGCGCATTTCGCCGGCCGCGCGACCTTCGAACAGGAGATGGGACGGCTTGCCGCGCAATGCAGGGCAAGCGCGGTCGCGCCGGGGCACGATCCGGTGCGCATTCCCGGAGACCACTCACTCGCCCGCAAGCGCGACCAGCTCGAAAACGGCGTGGGGCTGATCGAGACCATCGTCGACGGCATCCGCCCCTGGGCGGTCAGGCTGGACTGCCCCTTCCCCGAGCCGATCTGA
PROTEIN sequence
Length: 217
MVTITASTPTEAVVVPHGGLSRVFSCNPIAAGIPTDRDPILIDTTAAMSALGPLNRSYRLGQTLPAPLIVAQDGRVTDDPAEFVERGGGILPIGGTEQGYKGFSLALLTEALSGALGGFGRGSQTGDSEANGVFVQAIDPAHFAGRATFEQEMGRLAAQCRASAVAPGHDPVRIPGDHSLARKRDQLENGVGLIETIVDGIRPWAVRLDCPFPEPI*