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SCNpilot_expt_1000_bf_scaffold_8827_5

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: 3985..4659

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D053_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 224.0
  • Bit_score: 384
  • Evalue 9.20e-104
  • rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EYR78358.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 224.0
  • Bit_score: 384
  • Evalue 1.30e-103
transcriptional regulator GntR similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 210.0
  • Bit_score: 140
  • Evalue 5.60e-31

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGACAAGCCACGACACCGCCCATGGTGGGACGCTTGCGCCGGAACTGTCGCCCGTATCCCGCGACATGCTGCACGAGCAGATCTACGACATGCTGAAGCGCAACCTGATGATGGGACGCTTCACCCCCGGGCAGAAGCTTCCCCTGCGCGGCCTGGCCAAGAGCCTCGGCACCAGCCTCATGCCGGTCCGCGACGCGCTGCAGCGGCTGGAGAGCGTCGGCAGCGTGGTCTCGACGCCGAACAGGACGATGATGGTGCCGATCTTCAGCACCAAGGAGCTGGAGGACATCCGTACCCTGCGCTCGATCCTGGAAAGCGCCGCCCTCGAGCGCGCGGTGGAGAACCGCACGGAGGAGGAACTCGCGAAGCTGAAGGCCTATGTCGCCGACATCTGTCGCTCCGCGGAGATCAACGACATCGATCTCTTCCTGGAGGCCAACTACCATTTCCACATGATGATCGCGCAGATGAGCCGCCTTGCCTTCATCGGCCAGTTGCTGGAGCCGCTGTGGATGCATATCGGCCCCTCGGTCCGCCGCTCCGTCCCCAACGAGGCGCTCTTCCAGAGCTCGGCGCAGAACCACAGGGACGTCTATGACGCGATCGTGGCGAAAGACGCCAGGGCCGCCAACGAGGCGCTCCAGCGCGACATTTCCGAAGGCTACAACTTCTGA
PROTEIN sequence
Length: 225
MTSHDTAHGGTLAPELSPVSRDMLHEQIYDMLKRNLMMGRFTPGQKLPLRGLAKSLGTSLMPVRDALQRLESVGSVVSTPNRTMMVPIFSTKELEDIRTLRSILESAALERAVENRTEEELAKLKAYVADICRSAEINDIDLFLEANYHFHMMIAQMSRLAFIGQLLEPLWMHIGPSVRRSVPNEALFQSSAQNHRDVYDAIVAKDARAANEALQRDISEGYNF*