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SCNpilot_expt_1000_bf_scaffold_8907_2

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(594..1235)

Top 3 Functional Annotations

Value Algorithm Source
Biotin transport ATP-binding protein BioM {ECO:0000313|EMBL:EYR83108.1}; EC=3.6.3.- {ECO:0000313|EMBL:EYR83108.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 201.0
  • Bit_score: 345
  • Evalue 4.80e-92
Biotin transport ATP-binding protein BioM n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRT0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 201.0
  • Bit_score: 345
  • Evalue 3.40e-92
  • rbh
bioM; putative biotin transporter, ATP binding protein BioM; K02006 cobalt/nickel transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 200.0
  • Bit_score: 282
  • Evalue 1.50e-73

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGGCGGGCGCGTNNNNNNNNNNNNNNNNNNNNNNNNNCGAACGGCGCATGGGGGTGGTCGGCCTCAACGGCTCGGGCAAGACCACGATGGCGCGCCTCATCAACGGCCTCGTCAAGCCGAGCGAGGGCGCGGTCACGGTGGAGGGGCTCGATACGGTGACGGACGAGAAGGCCGCGCGCGGCAAGACCGGCTTCATCTTCCAGAACCCGCAGCACCAGATGATCCTTCCCGTCCTTGCCGAGGACATCGCCTTCGGCCTGAAGAACCGGGGCTTCACCAAGGCGGAGATCGCCGAGAGGACCGAGGCGATCCTCGCGCGCTTCGACATCGCGCATCTTGCCCGCCGCCGCGTGCACGAGCTTTCGGGCGGCGAGACGCAGCTTGCGGCCATCGCCAGCGTGCTCGTCACCGGGCCGGACCTCCTGATCCTCGACGAGCCGACCAACCAGCTCGACCTCAGGAACCGCGCGATGATCGAGCGGACGCTCGCGGGCCTGCCCGAACAGGTCATCGTCATCACGCACGACCTTGCGCTGCTCGACGGCTTCGACCGGGTGCTCGTCTTCCATGCCGGCCGGCTTGCGGCGGACGGGAGGCCGGCGGAGGCGGTCGCCGCCTACCGGGAGATCGCGGCGTGCTGA
PROTEIN sequence
Length: 214
MAGAXXXXXXXXXERRMGVVGLNGSGKTTMARLINGLVKPSEGAVTVEGLDTVTDEKAARGKTGFIFQNPQHQMILPVLAEDIAFGLKNRGFTKAEIAERTEAILARFDIAHLARRRVHELSGGETQLAAIASVLVTGPDLLILDEPTNQLDLRNRAMIERTLAGLPEQVIVITHDLALLDGFDRVLVFHAGRLAADGRPAEAVAAYREIAAC*