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SCNpilot_expt_1000_bf_scaffold_8750_6

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(5260..6648)

Top 3 Functional Annotations

Value Algorithm Source
Glyoxylate carboligase Gcl {ECO:0000313|EMBL:EYR82261.1}; EC=4.1.1.47 {ECO:0000313|EMBL:EYR82261.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 462.0
  • Bit_score: 876
  • Evalue 1.30e-251
glyoxylate carboligase (EC:4.1.1.47); K01608 tartronate-semialdehyde synthase [EC:4.1.1.47] similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 462.0
  • Bit_score: 861
  • Evalue 1.30e-247
Glyoxylate carboligase Gcl n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EKF9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 462.0
  • Bit_score: 876
  • Evalue 9.30e-252

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1389
ATGGAGCCGGGCCTCGTGCCTTACGTCTTCCAGAAGGCGTTCCACACGATGCGCTCCGGCCGTCCCGGCCCTGTCCTCATCGACCTGCCGATCGACGTCCAGCTCGCCGAGATCGAGTTCGATATCGACGCCTACGAGCCGCTGACGCCCTACAAGCCGGCCGCCACCCGCGCCCAGGCCGAGAAGGCGCTGGCCATGCTCAACGAAGCCGAGCGCCCGCTGCTCGTCGCCGGCGGTGGCATCATCAACGCGAATGCCTCGGACCTCCTGGTCGAGCTTGCGGAAATCACCGGCGTTCCCGTCATCCCGACGCTGATGGGCTGGGGCGTCATCCCGGACGATCACCCGCTGATGGCCGGCATGTGCGGCCTCCAGACCTCGCACCGCTACGGCAATGCCACGCTGCTCGCCTCGGACTTCGTCTTCGGCATCGGCAACCGCTGGGCGAACCGCCACACCGGCAACATCCCGACCTATACGGAAGGGCGCAAGTTCATCCACGTCGACATCGAGCCGACCCAGATCGGCCGTGTCTTCACGCCGGACTTCGGCATCGTCTCCGATGCCGGCGCCGCCCTTCAGGTCTTCGTCGAGGTCGCCACGGAATGGAAGGCGGCGGGCAAGCTGCGCGACCGGTCCGGCTGGGCAGGTGAATGCCGCGAGCGCAAGCGAACCATGCTGCGCAAGACCCATTTCGACCAGATGCCGCTGAAGCCCCAGCGCGTCTACGAGGAGATGAATAAGGCCTTCGACCGCGACACCTGCTACGTCTCGACCATCGGCCTCAGCCAGATCGCCGGCGCGCAGTTCCTGCATGTCTACAAGCCGCGCAACTGGATCAATTGCGGCCAGGCCGGCCCGCTCGGCTGGACGCTGCCGGCAGCGCTCGGCGTGCGCGCCGCCGACCCGGACCGTCCGATCGTCGCTCTGTCGGGTGACTACGACTTCCAGTTCCTCATCGAGGAGCTTGCGGTCGGCGCCCAGCACAAGCTGCCCTACCTGCATGTGGTCGTGAACAATTCCTATCTCGGCCTCATCCGCCAGGCCCAGCGCGGCTTCAACATGGACTTCGAGGTCTCGCTCGCCTTCGACAACATCAATGCGAATGCCGACTCGGAAGCCGGCTACGGCGTCGATCATGTCGCGGTCGCCGAAGGCCTCGGTTGCAAGGCGATCCGCGTTCGCAGCGCCAACGAGTTCCAGGAAGCCTTCAACACGGCGCAGAGGCTGATGAAGGAGCACCAGGTTCCCGTTGTCATCGAGTTCATCCTCGAGCGCGTCACGAACATCGCCATGGGCGCCGACATCAACGCTGTCGTCGAGTTCGAGGAACTGGCAGAACGCGGCGAGGACGCGCCGACGGCAACGCTGGCCGCGCTGCTGGATTGA
PROTEIN sequence
Length: 463
MEPGLVPYVFQKAFHTMRSGRPGPVLIDLPIDVQLAEIEFDIDAYEPLTPYKPAATRAQAEKALAMLNEAERPLLVAGGGIINANASDLLVELAEITGVPVIPTLMGWGVIPDDHPLMAGMCGLQTSHRYGNATLLASDFVFGIGNRWANRHTGNIPTYTEGRKFIHVDIEPTQIGRVFTPDFGIVSDAGAALQVFVEVATEWKAAGKLRDRSGWAGECRERKRTMLRKTHFDQMPLKPQRVYEEMNKAFDRDTCYVSTIGLSQIAGAQFLHVYKPRNWINCGQAGPLGWTLPAALGVRAADPDRPIVALSGDYDFQFLIEELAVGAQHKLPYLHVVVNNSYLGLIRQAQRGFNMDFEVSLAFDNINANADSEAGYGVDHVAVAEGLGCKAIRVRSANEFQEAFNTAQRLMKEHQVPVVIEFILERVTNIAMGADINAVVEFEELAERGEDAPTATLAALLD*