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SCNpilot_expt_1000_bf_scaffold_8750_13

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(14940..15383)

Top 3 Functional Annotations

Value Algorithm Source
Putative xanthine dehydrogenase subunit E {ECO:0000313|EMBL:EYR82271.1}; EC=1.17.1.4 {ECO:0000313|EMBL:EYR82271.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 147.0
  • Bit_score: 247
  • Evalue 1.20e-62
Putative xanthine dehydrogenase subunit E n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ESU2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 147.0
  • Bit_score: 247
  • Evalue 8.80e-63
xdhA2; xanthine dehydrogenase, small subunit similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 147.0
  • Bit_score: 240
  • Evalue 2.60e-61

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
TTCATCGCCTATGGCAAGCAGGACCGCCAGCCGGGCGAATTCGTCGAGGCCGTGCATGTTCCGGTGCCGGCGGCCTCGGAAAAGGTCGCCATCTACAAGGTGACCAAGCGCCGCGACGAGGACATCACCGCGACGCTCGGCGCCTTCCGCCTGGCGCTGGCCGACGACGGCACGGTGGCGGCGATCACGATCGCCTATGGCGGCATGGCGGCGACGCCGAAGCGCGCCTTCGCCGTCGAGGCCGCGCTTCTCGGAAAGCCCTGGACCGAGGCGACCGTGGAAGCGGCCATGGAGACGTACACGGAAGACTACGCACCGCTGACCGACATGCGCGCAACCGCCGAATACCGCGCGCTGGTGGCAAGGAACCTGCTTCTGCGGTTCTTCGTGGAAACCACATCCGGCGCGGCGAGCGCGCAGGTGCAACGATACGAGGCAGCGTGA
PROTEIN sequence
Length: 148
FIAYGKQDRQPGEFVEAVHVPVPAASEKVAIYKVTKRRDEDITATLGAFRLALADDGTVAAITIAYGGMAATPKRAFAVEAALLGKPWTEATVEAAMETYTEDYAPLTDMRATAEYRALVARNLLLRFFVETTSGAASAQVQRYEAA*