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SCNpilot_expt_1000_bf_scaffold_8612_7

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(6383..6748)

Top 3 Functional Annotations

Value Algorithm Source
ABC sugar transporter, inner membrane subunit n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UHQ1_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 242
  • Evalue 1.80e-61
ABC sugar transporter, inner membrane subunit {ECO:0000313|EMBL:EGP54120.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 242
  • Evalue 2.50e-61
ABC-type sugar transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 121.0
  • Bit_score: 211
  • Evalue 1.80e-52

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
TTCCTGATCCGCGCCTACATGCTGGGGCTGCCGCGCGACCTCGACGAGGCGGCGATCATGGACGGCGCCAGCGAGGGGCAGATCTTCTGGAAGGTGACGCTGCCGCTGTGCAAGCCGATCCTGGTATCCTGCGTCATCCTGCATGTGCTCTTCGCCTGGAACGAATATCTCTTCGCGATGATCTTCACCAGCGGCGCGGACCTGCAGACGCTGCCGGTCGGCCTCACCTCCATCATGGCCAAGCACGGCACCAACTATGCCGTCGTCTTCGCCGCCATGACGCTCTCGGCGCTTCCCATCGTCATCACCTTCTTCGCGGCCCAGCGCTTCTTCATCCGCGGGCTCGCCGAAGGCATCGGAAAGTAG
PROTEIN sequence
Length: 122
FLIRAYMLGLPRDLDEAAIMDGASEGQIFWKVTLPLCKPILVSCVILHVLFAWNEYLFAMIFTSGADLQTLPVGLTSIMAKHGTNYAVVFAAMTLSALPIVITFFAAQRFFIRGLAEGIGK*