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SCNpilot_expt_1000_bf_scaffold_8066_3

Organism: SCNPILOT_EXPT_1000_BF_Shinella_65_6

near complete RP 43 / 55 MC: 6 BSCG 46 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(1864..2283)

Top 3 Functional Annotations

Value Algorithm Source
Uroporphyrinogen-III C-methyltransferase CobA {ECO:0000313|EMBL:EYR80638.1}; EC=2.1.1.107 {ECO:0000313|EMBL:EYR80638.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 139.0
  • Bit_score: 252
  • Evalue 3.60e-64
Uroporphyrinogen-III C-methyltransferase CobA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLD9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 139.0
  • Bit_score: 252
  • Evalue 2.60e-64
cobA; uroporphyrin-III C-methyltransferase similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 139.0
  • Bit_score: 240
  • Evalue 4.20e-61

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
GTGACGCATCGCGAGGTCAACCACGCCGTCACCTTCCTGACCGGCCACGATTCCTCCGGCCTCGTGCCGGATCGCATCAACTGGGAGGGCATCGCCAAGGGCTCGCCCGTCATCGTCATGTACATGGCGATGAAGCATATCGGCCAGATCGCCGCGAACCTCGTCGCCGGCGGTCGCTCGCCGGACGAGCCGGTCGCCTTCGTCTGCAATGCCGCCACGCCCGATCAGGCCGTGCTGGAAACGACGCTCGCCCGCGCCGAGGCCGATGTCGCGGCCGCCGGCATCGAGCCGCCCGCCATCGTCGTCGTCGGCGAGGTCGTGCGCCTTCGTCCCTCGCTCGACTGGATCGGCGCGCTGACGCAAGGCCGCAGGCTCGCGCCCGATCCGTTCGGCTCGCGCGAGATGAAGGATCCGGCATGA
PROTEIN sequence
Length: 140
VTHREVNHAVTFLTGHDSSGLVPDRINWEGIAKGSPVIVMYMAMKHIGQIAANLVAGGRSPDEPVAFVCNAATPDQAVLETTLARAEADVAAAGIEPPAIVVVGEVVRLRPSLDWIGALTQGRRLAPDPFGSREMKDPA*